Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21162 | 63709;63710;63711 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
N2AB | 19521 | 58786;58787;58788 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
N2A | 18594 | 56005;56006;56007 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
N2B | 12097 | 36514;36515;36516 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
Novex-1 | 12222 | 36889;36890;36891 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
Novex-2 | 12289 | 37090;37091;37092 | chr2:178587923;178587922;178587921 | chr2:179452650;179452649;179452648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | N | 0.813 | 0.369 | 0.299086750705 | gnomAD-4.0.0 | 2.76471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.62749E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4675 | ambiguous | 0.4827 | ambiguous | -0.871 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/D | 0.4584 | ambiguous | 0.4441 | ambiguous | -1.087 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.479761078 | None | None | N |
A/E | 0.4169 | ambiguous | 0.4126 | ambiguous | -1.169 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/F | 0.48 | ambiguous | 0.4825 | ambiguous | -0.981 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/G | 0.138 | likely_benign | 0.1378 | benign | -0.97 | Destabilizing | 0.999 | D | 0.722 | deleterious | N | 0.452249074 | None | None | N |
A/H | 0.5795 | likely_pathogenic | 0.5885 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
A/I | 0.3444 | ambiguous | 0.3448 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
A/K | 0.5671 | likely_pathogenic | 0.5757 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
A/L | 0.3443 | ambiguous | 0.3486 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
A/M | 0.338 | likely_benign | 0.3496 | ambiguous | -0.379 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/N | 0.3328 | likely_benign | 0.3346 | benign | -0.852 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/P | 0.1244 | likely_benign | 0.1221 | benign | -0.502 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.444146041 | None | None | N |
A/Q | 0.468 | ambiguous | 0.4776 | ambiguous | -1.084 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
A/R | 0.527 | ambiguous | 0.5233 | ambiguous | -0.765 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/S | 0.1124 | likely_benign | 0.111 | benign | -1.125 | Destabilizing | 0.999 | D | 0.746 | deleterious | N | 0.497209734 | None | None | N |
A/T | 0.1295 | likely_benign | 0.1282 | benign | -1.124 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.451742095 | None | None | N |
A/V | 0.1883 | likely_benign | 0.185 | benign | -0.502 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.494089284 | None | None | N |
A/W | 0.7698 | likely_pathogenic | 0.7713 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/Y | 0.5793 | likely_pathogenic | 0.5902 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.