Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21165 | 63718;63719;63720 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
N2AB | 19524 | 58795;58796;58797 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
N2A | 18597 | 56014;56015;56016 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
N2B | 12100 | 36523;36524;36525 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
Novex-1 | 12225 | 36898;36899;36900 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
Novex-2 | 12292 | 37099;37100;37101 | chr2:178587914;178587913;178587912 | chr2:179452641;179452640;179452639 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.83 | 0.394 | 0.415564226483 | gnomAD-4.0.0 | 2.77185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.63498E-06 | 0 | 0 |
P/R | None | None | 1.0 | N | 0.839 | 0.402 | 0.337868961071 | gnomAD-4.0.0 | 6.92963E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08746E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2386 | likely_benign | 0.2418 | benign | -2.477 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | N | 0.413764419 | None | None | N |
P/C | 0.8649 | likely_pathogenic | 0.8676 | pathogenic | -2.371 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.9949 | likely_pathogenic | 0.9955 | pathogenic | -3.46 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/E | 0.9779 | likely_pathogenic | 0.9797 | pathogenic | -3.218 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/F | 0.9931 | likely_pathogenic | 0.9935 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/G | 0.8643 | likely_pathogenic | 0.8701 | pathogenic | -2.976 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/H | 0.9818 | likely_pathogenic | 0.9827 | pathogenic | -2.561 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.46640331 | None | None | N |
P/I | 0.8151 | likely_pathogenic | 0.8141 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
P/K | 0.9861 | likely_pathogenic | 0.9864 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
P/L | 0.6493 | likely_pathogenic | 0.6531 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.487624672 | None | None | N |
P/M | 0.8737 | likely_pathogenic | 0.8716 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
P/N | 0.9761 | likely_pathogenic | 0.9769 | pathogenic | -2.49 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/Q | 0.9455 | likely_pathogenic | 0.9467 | pathogenic | -2.266 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/R | 0.961 | likely_pathogenic | 0.9608 | pathogenic | -1.837 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.465389352 | None | None | N |
P/S | 0.7638 | likely_pathogenic | 0.7682 | pathogenic | -2.992 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.465135862 | None | None | N |
P/T | 0.5616 | ambiguous | 0.5567 | ambiguous | -2.62 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.485664589 | None | None | N |
P/V | 0.5683 | likely_pathogenic | 0.5649 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/W | 0.9975 | likely_pathogenic | 0.9977 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
P/Y | 0.993 | likely_pathogenic | 0.9935 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.