Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21166 | 63721;63722;63723 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
N2AB | 19525 | 58798;58799;58800 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
N2A | 18598 | 56017;56018;56019 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
N2B | 12101 | 36526;36527;36528 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
Novex-1 | 12226 | 36901;36902;36903 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
Novex-2 | 12293 | 37102;37103;37104 | chr2:178587911;178587910;178587909 | chr2:179452638;179452637;179452636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1315515272 | -0.388 | 0.999 | N | 0.701 | 0.259 | 0.246773566709 | gnomAD-2.1.1 | 4.42E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.6E-05 | None | 0 | 0 | 0 |
K/T | rs1315515272 | -0.388 | 0.999 | N | 0.701 | 0.259 | 0.246773566709 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
K/T | rs1315515272 | -0.388 | 0.999 | N | 0.701 | 0.259 | 0.246773566709 | gnomAD-4.0.0 | 6.57834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3198 | likely_benign | 0.3174 | benign | -0.332 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/C | 0.6213 | likely_pathogenic | 0.6291 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/D | 0.6918 | likely_pathogenic | 0.691 | pathogenic | -0.096 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
K/E | 0.1508 | likely_benign | 0.1427 | benign | None | Stabilizing | 0.997 | D | 0.688 | prob.delet. | N | 0.497628235 | None | None | N |
K/F | 0.8223 | likely_pathogenic | 0.8126 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/G | 0.496 | ambiguous | 0.4948 | ambiguous | -0.69 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
K/H | 0.3673 | ambiguous | 0.3771 | ambiguous | -1.077 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
K/I | 0.3288 | likely_benign | 0.3196 | benign | 0.585 | Stabilizing | 0.999 | D | 0.779 | deleterious | N | 0.462258572 | None | None | N |
K/L | 0.3655 | ambiguous | 0.3684 | ambiguous | 0.585 | Stabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
K/M | 0.2281 | likely_benign | 0.2246 | benign | 0.382 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/N | 0.5247 | ambiguous | 0.5347 | ambiguous | -0.302 | Destabilizing | 0.999 | D | 0.733 | deleterious | N | 0.48649212 | None | None | N |
K/P | 0.9337 | likely_pathogenic | 0.9328 | pathogenic | 0.31 | Stabilizing | 0.999 | D | 0.692 | prob.delet. | None | None | None | None | N |
K/Q | 0.1138 | likely_benign | 0.1154 | benign | -0.35 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.506999867 | None | None | N |
K/R | 0.0821 | likely_benign | 0.0805 | benign | -0.607 | Destabilizing | 0.997 | D | 0.646 | neutral | N | 0.449703789 | None | None | N |
K/S | 0.4361 | ambiguous | 0.4434 | ambiguous | -0.854 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
K/T | 0.1532 | likely_benign | 0.1519 | benign | -0.562 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | N | 0.453548839 | None | None | N |
K/V | 0.2331 | likely_benign | 0.2291 | benign | 0.31 | Stabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
K/W | 0.8211 | likely_pathogenic | 0.807 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
K/Y | 0.7451 | likely_pathogenic | 0.7393 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.