Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21177 | 63754;63755;63756 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
N2AB | 19536 | 58831;58832;58833 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
N2A | 18609 | 56050;56051;56052 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
N2B | 12112 | 36559;36560;36561 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
Novex-1 | 12237 | 36934;36935;36936 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
Novex-2 | 12304 | 37135;37136;37137 | chr2:178587780;178587779;178587778 | chr2:179452507;179452506;179452505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs879247635 | None | 0.993 | N | 0.503 | 0.324 | 0.402326594622 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs879247635 | None | 0.993 | N | 0.503 | 0.324 | 0.402326594622 | gnomAD-4.0.0 | 6.57661E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8249 | likely_pathogenic | 0.8053 | pathogenic | -0.239 | Destabilizing | 0.958 | D | 0.65 | neutral | D | 0.528240715 | None | None | N |
D/C | 0.9741 | likely_pathogenic | 0.9719 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/E | 0.8259 | likely_pathogenic | 0.8117 | pathogenic | -0.203 | Destabilizing | 0.993 | D | 0.503 | neutral | N | 0.513589045 | None | None | N |
D/F | 0.9811 | likely_pathogenic | 0.9771 | pathogenic | -0.108 | Destabilizing | 0.991 | D | 0.792 | deleterious | None | None | None | None | N |
D/G | 0.8578 | likely_pathogenic | 0.8528 | pathogenic | -0.42 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | D | 0.529508162 | None | None | N |
D/H | 0.906 | likely_pathogenic | 0.8826 | pathogenic | 0.282 | Stabilizing | 0.999 | D | 0.761 | deleterious | D | 0.529761652 | None | None | N |
D/I | 0.9673 | likely_pathogenic | 0.9591 | pathogenic | 0.186 | Stabilizing | 0.334 | N | 0.513 | neutral | None | None | None | None | N |
D/K | 0.9737 | likely_pathogenic | 0.9691 | pathogenic | 0.335 | Stabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
D/L | 0.9188 | likely_pathogenic | 0.9046 | pathogenic | 0.186 | Stabilizing | 0.839 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/M | 0.9817 | likely_pathogenic | 0.9778 | pathogenic | 0.159 | Stabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
D/N | 0.75 | likely_pathogenic | 0.7271 | pathogenic | -0.012 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | D | 0.528494204 | None | None | N |
D/P | 0.9297 | likely_pathogenic | 0.9218 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
D/Q | 0.9492 | likely_pathogenic | 0.9452 | pathogenic | 0.038 | Stabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
D/R | 0.9691 | likely_pathogenic | 0.9654 | pathogenic | 0.591 | Stabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
D/S | 0.7485 | likely_pathogenic | 0.7292 | pathogenic | -0.119 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
D/T | 0.9173 | likely_pathogenic | 0.9088 | pathogenic | 0.032 | Stabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/V | 0.8957 | likely_pathogenic | 0.8755 | pathogenic | 0.065 | Stabilizing | 0.797 | D | 0.675 | neutral | D | 0.529001183 | None | None | N |
D/W | 0.9951 | likely_pathogenic | 0.9943 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
D/Y | 0.8805 | likely_pathogenic | 0.8539 | pathogenic | 0.137 | Stabilizing | 0.998 | D | 0.782 | deleterious | D | 0.530015141 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.