Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21182 | 63769;63770;63771 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
N2AB | 19541 | 58846;58847;58848 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
N2A | 18614 | 56065;56066;56067 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
N2B | 12117 | 36574;36575;36576 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
Novex-1 | 12242 | 36949;36950;36951 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
Novex-2 | 12309 | 37150;37151;37152 | chr2:178587765;178587764;178587763 | chr2:179452492;179452491;179452490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs565176987 | 0.249 | 0.067 | D | 0.346 | 0.22 | 0.266385636622 | gnomAD-2.1.1 | 7.27E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.03821E-04 | None | 0 | None | 0 | 0 | 0 |
K/E | rs565176987 | 0.249 | 0.067 | D | 0.346 | 0.22 | 0.266385636622 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 5.81621E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs565176987 | 0.249 | 0.067 | D | 0.346 | 0.22 | 0.266385636622 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
K/E | rs565176987 | 0.249 | 0.067 | D | 0.346 | 0.22 | 0.266385636622 | gnomAD-4.0.0 | 6.46277E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.22124E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7859 | likely_pathogenic | 0.7662 | pathogenic | 0.024 | Stabilizing | 0.968 | D | 0.606 | neutral | None | None | None | None | I |
K/C | 0.9182 | likely_pathogenic | 0.9139 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/D | 0.7641 | likely_pathogenic | 0.7231 | pathogenic | 0.103 | Stabilizing | 0.938 | D | 0.62 | neutral | None | None | None | None | I |
K/E | 0.5737 | likely_pathogenic | 0.5053 | ambiguous | 0.11 | Stabilizing | 0.067 | N | 0.346 | neutral | D | 0.529899022 | None | None | I |
K/F | 0.9819 | likely_pathogenic | 0.9782 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
K/G | 0.7063 | likely_pathogenic | 0.6868 | pathogenic | -0.161 | Destabilizing | 0.991 | D | 0.536 | neutral | None | None | None | None | I |
K/H | 0.524 | ambiguous | 0.5006 | ambiguous | -0.37 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
K/I | 0.9105 | likely_pathogenic | 0.8949 | pathogenic | 0.427 | Stabilizing | 0.994 | D | 0.65 | neutral | N | 0.507934414 | None | None | I |
K/L | 0.8222 | likely_pathogenic | 0.8074 | pathogenic | 0.427 | Stabilizing | 0.991 | D | 0.555 | neutral | None | None | None | None | I |
K/M | 0.7467 | likely_pathogenic | 0.7113 | pathogenic | 0.141 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
K/N | 0.6908 | likely_pathogenic | 0.649 | pathogenic | 0.142 | Stabilizing | 0.988 | D | 0.666 | neutral | N | 0.484461334 | None | None | I |
K/P | 0.8807 | likely_pathogenic | 0.8773 | pathogenic | 0.32 | Stabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | I |
K/Q | 0.2696 | likely_benign | 0.2588 | benign | 0.003 | Stabilizing | 0.976 | D | 0.649 | neutral | N | 0.466581049 | None | None | I |
K/R | 0.1119 | likely_benign | 0.1125 | benign | -0.064 | Destabilizing | 0.958 | D | 0.629 | neutral | N | 0.480857068 | None | None | I |
K/S | 0.7348 | likely_pathogenic | 0.7046 | pathogenic | -0.331 | Destabilizing | 0.968 | D | 0.661 | neutral | None | None | None | None | I |
K/T | 0.564 | likely_pathogenic | 0.5255 | ambiguous | -0.179 | Destabilizing | 0.988 | D | 0.625 | neutral | N | 0.486409891 | None | None | I |
K/V | 0.8685 | likely_pathogenic | 0.846 | pathogenic | 0.32 | Stabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | I |
K/W | 0.9686 | likely_pathogenic | 0.9645 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
K/Y | 0.916 | likely_pathogenic | 0.9004 | pathogenic | 0.105 | Stabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.