Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21189 | 63790;63791;63792 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
N2AB | 19548 | 58867;58868;58869 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
N2A | 18621 | 56086;56087;56088 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
N2B | 12124 | 36595;36596;36597 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
Novex-1 | 12249 | 36970;36971;36972 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
Novex-2 | 12316 | 37171;37172;37173 | chr2:178587744;178587743;178587742 | chr2:179452471;179452470;179452469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 0.999 | D | 0.834 | 0.823 | 0.879814937172 | gnomAD-4.0.0 | 1.36963E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5812 | likely_pathogenic | 0.5686 | pathogenic | -0.294 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | D | 0.598287855 | None | None | I |
G/C | 0.6756 | likely_pathogenic | 0.6687 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/D | 0.787 | likely_pathogenic | 0.7703 | pathogenic | -0.773 | Destabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | I |
G/E | 0.8789 | likely_pathogenic | 0.8584 | pathogenic | -0.952 | Destabilizing | 0.652 | D | 0.601 | neutral | D | 0.608715623 | None | None | I |
G/F | 0.9698 | likely_pathogenic | 0.968 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/H | 0.8786 | likely_pathogenic | 0.8732 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
G/I | 0.9654 | likely_pathogenic | 0.9582 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/K | 0.9238 | likely_pathogenic | 0.9182 | pathogenic | -0.742 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | I |
G/L | 0.9307 | likely_pathogenic | 0.9323 | pathogenic | -0.506 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | I |
G/M | 0.9425 | likely_pathogenic | 0.943 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
G/N | 0.6643 | likely_pathogenic | 0.6689 | pathogenic | -0.407 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | I |
G/P | 0.9948 | likely_pathogenic | 0.9938 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | I |
G/Q | 0.8191 | likely_pathogenic | 0.8081 | pathogenic | -0.749 | Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | I |
G/R | 0.8297 | likely_pathogenic | 0.8039 | pathogenic | -0.25 | Destabilizing | 0.997 | D | 0.85 | deleterious | D | 0.619616643 | None | None | I |
G/S | 0.3335 | likely_benign | 0.3286 | benign | -0.505 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | I |
G/T | 0.7574 | likely_pathogenic | 0.7339 | pathogenic | -0.624 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | I |
G/V | 0.9201 | likely_pathogenic | 0.9057 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.834 | deleterious | D | 0.652089334 | None | None | I |
G/W | 0.9568 | likely_pathogenic | 0.9462 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/Y | 0.9408 | likely_pathogenic | 0.9399 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.