Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2119 | 6580;6581;6582 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
N2AB | 2119 | 6580;6581;6582 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
N2A | 2119 | 6580;6581;6582 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
N2B | 2073 | 6442;6443;6444 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
Novex-1 | 2073 | 6442;6443;6444 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
Novex-2 | 2073 | 6442;6443;6444 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
Novex-3 | 2119 | 6580;6581;6582 | chr2:178775509;178775508;178775507 | chr2:179640236;179640235;179640234 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs869312098 | None | 1.0 | N | 0.555 | 0.318 | 0.375326005269 | gnomAD-4.0.0 | 4.77242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77593E-05 | None | 0 | 0 | 5.71327E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1788 | likely_benign | 0.1799 | benign | -0.031 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.497161467 | None | None | N |
E/C | 0.9015 | likely_pathogenic | 0.9029 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/D | 0.1211 | likely_benign | 0.1214 | benign | -0.386 | Destabilizing | 0.999 | D | 0.449 | neutral | N | 0.481900073 | None | None | N |
E/F | 0.8264 | likely_pathogenic | 0.82 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
E/G | 0.2147 | likely_benign | 0.2168 | benign | -0.172 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.505380194 | None | None | N |
E/H | 0.5596 | ambiguous | 0.5403 | ambiguous | 0.746 | Stabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
E/I | 0.4318 | ambiguous | 0.41 | ambiguous | 0.29 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/K | 0.2344 | likely_benign | 0.2272 | benign | 0.383 | Stabilizing | 0.999 | D | 0.615 | neutral | N | 0.48702858 | None | None | N |
E/L | 0.4351 | ambiguous | 0.4241 | ambiguous | 0.29 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/M | 0.5527 | ambiguous | 0.544 | ambiguous | -0.044 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
E/N | 0.2682 | likely_benign | 0.2585 | benign | -0.059 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/P | 0.4445 | ambiguous | 0.4681 | ambiguous | 0.201 | Stabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
E/Q | 0.1542 | likely_benign | 0.1503 | benign | -0.01 | Destabilizing | 1.0 | D | 0.555 | neutral | N | 0.481752431 | None | None | N |
E/R | 0.3817 | ambiguous | 0.3775 | ambiguous | 0.709 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
E/S | 0.1942 | likely_benign | 0.1899 | benign | -0.158 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/T | 0.2354 | likely_benign | 0.2313 | benign | -0.026 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.268 | likely_benign | 0.2577 | benign | 0.201 | Stabilizing | 1.0 | D | 0.667 | neutral | N | 0.508729849 | None | None | N |
E/W | 0.951 | likely_pathogenic | 0.9496 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
E/Y | 0.7656 | likely_pathogenic | 0.7543 | pathogenic | 0.304 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.