Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21192 | 63799;63800;63801 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
N2AB | 19551 | 58876;58877;58878 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
N2A | 18624 | 56095;56096;56097 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
N2B | 12127 | 36604;36605;36606 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
Novex-1 | 12252 | 36979;36980;36981 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
Novex-2 | 12319 | 37180;37181;37182 | chr2:178587735;178587734;178587733 | chr2:179452462;179452461;179452460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs758357424 | -1.013 | 0.993 | N | 0.359 | 0.24 | 0.366277470483 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
I/V | rs758357424 | -1.013 | 0.993 | N | 0.359 | 0.24 | 0.366277470483 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
I/V | rs758357424 | -1.013 | 0.993 | N | 0.359 | 0.24 | 0.366277470483 | gnomAD-4.0.0 | 1.97371E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.41462E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9625 | likely_pathogenic | 0.9638 | pathogenic | -2.771 | Highly Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
I/C | 0.9779 | likely_pathogenic | 0.9816 | pathogenic | -2.075 | Highly Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
I/D | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -3.278 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
I/E | 0.998 | likely_pathogenic | 0.9974 | pathogenic | -3.015 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
I/F | 0.7411 | likely_pathogenic | 0.7123 | pathogenic | -1.653 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.511928471 | None | None | I |
I/G | 0.9967 | likely_pathogenic | 0.9964 | pathogenic | -3.357 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
I/H | 0.9973 | likely_pathogenic | 0.9968 | pathogenic | -2.825 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/K | 0.9964 | likely_pathogenic | 0.9954 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
I/L | 0.2256 | likely_benign | 0.2204 | benign | -1.054 | Destabilizing | 0.993 | D | 0.398 | neutral | N | 0.382478719 | None | None | I |
I/M | 0.3946 | ambiguous | 0.3926 | ambiguous | -0.971 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.463302664 | None | None | I |
I/N | 0.9923 | likely_pathogenic | 0.9908 | pathogenic | -2.851 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.49787856 | None | None | I |
I/P | 0.9957 | likely_pathogenic | 0.9947 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
I/Q | 0.9948 | likely_pathogenic | 0.9933 | pathogenic | -2.652 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
I/R | 0.9945 | likely_pathogenic | 0.9922 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
I/S | 0.9861 | likely_pathogenic | 0.985 | pathogenic | -3.532 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.486268765 | None | None | I |
I/T | 0.9771 | likely_pathogenic | 0.9781 | pathogenic | -3.112 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.515507494 | None | None | I |
I/V | 0.1499 | likely_benign | 0.1763 | benign | -1.61 | Destabilizing | 0.993 | D | 0.359 | neutral | N | 0.459147205 | None | None | I |
I/W | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -2.091 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
I/Y | 0.9862 | likely_pathogenic | 0.9833 | pathogenic | -1.812 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.