Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21207 | 63844;63845;63846 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
N2AB | 19566 | 58921;58922;58923 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
N2A | 18639 | 56140;56141;56142 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
N2B | 12142 | 36649;36650;36651 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
Novex-1 | 12267 | 37024;37025;37026 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
Novex-2 | 12334 | 37225;37226;37227 | chr2:178587690;178587689;178587688 | chr2:179452417;179452416;179452415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 1.0 | D | 0.727 | 0.604 | 0.498705051145 | gnomAD-4.0.0 | 1.59309E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86085E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1156 | likely_benign | 0.1126 | benign | -0.878 | Destabilizing | 0.996 | D | 0.501 | neutral | N | 0.501443635 | None | None | I |
T/C | 0.4535 | ambiguous | 0.4732 | ambiguous | -0.542 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
T/D | 0.6088 | likely_pathogenic | 0.5599 | ambiguous | -0.092 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
T/E | 0.4223 | ambiguous | 0.386 | ambiguous | -0.012 | Destabilizing | 0.994 | D | 0.585 | neutral | None | None | None | None | I |
T/F | 0.2863 | likely_benign | 0.2723 | benign | -0.748 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
T/G | 0.3817 | ambiguous | 0.3863 | ambiguous | -1.21 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
T/H | 0.3254 | likely_benign | 0.312 | benign | -1.372 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
T/I | 0.1604 | likely_benign | 0.1576 | benign | -0.061 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.507586154 | None | None | I |
T/K | 0.34 | ambiguous | 0.315 | benign | -0.545 | Destabilizing | 0.994 | D | 0.615 | neutral | None | None | None | None | I |
T/L | 0.1146 | likely_benign | 0.115 | benign | -0.061 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
T/M | 0.1059 | likely_benign | 0.1063 | benign | None | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
T/N | 0.1767 | likely_benign | 0.1697 | benign | -0.721 | Destabilizing | 0.999 | D | 0.625 | neutral | D | 0.523195194 | None | None | I |
T/P | 0.627 | likely_pathogenic | 0.6084 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.546668273 | None | None | I |
T/Q | 0.2889 | likely_benign | 0.276 | benign | -0.692 | Destabilizing | 0.967 | D | 0.429 | neutral | None | None | None | None | I |
T/R | 0.3052 | likely_benign | 0.2743 | benign | -0.521 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
T/S | 0.1371 | likely_benign | 0.1327 | benign | -1.058 | Destabilizing | 0.996 | D | 0.485 | neutral | N | 0.500616265 | None | None | I |
T/V | 0.1432 | likely_benign | 0.1422 | benign | -0.3 | Destabilizing | 0.998 | D | 0.528 | neutral | None | None | None | None | I |
T/W | 0.6961 | likely_pathogenic | 0.6891 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
T/Y | 0.35 | ambiguous | 0.3373 | benign | -0.45 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.