Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21229 | 63910;63911;63912 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
N2AB | 19588 | 58987;58988;58989 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
N2A | 18661 | 56206;56207;56208 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
N2B | 12164 | 36715;36716;36717 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
Novex-1 | 12289 | 37090;37091;37092 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
Novex-2 | 12356 | 37291;37292;37293 | chr2:178587624;178587623;178587622 | chr2:179452351;179452350;179452349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1209410552 | None | 0.961 | N | 0.705 | 0.222 | 0.350088858571 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs1209410552 | None | 0.961 | N | 0.705 | 0.222 | 0.350088858571 | gnomAD-4.0.0 | 1.02638E-05 | None | None | None | None | N | None | 0 | 1.69727E-05 | None | 0 | 9.76276E-05 | None | 0 | 0 | 7.18522E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5814 | likely_pathogenic | 0.556 | ambiguous | -0.389 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
A/D | 0.9482 | likely_pathogenic | 0.9379 | pathogenic | -2.097 | Highly Destabilizing | 0.989 | D | 0.749 | deleterious | N | 0.490995838 | None | None | N |
A/E | 0.9146 | likely_pathogenic | 0.898 | pathogenic | -1.811 | Destabilizing | 0.97 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/F | 0.8593 | likely_pathogenic | 0.8324 | pathogenic | -0.309 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
A/G | 0.3713 | ambiguous | 0.3537 | ambiguous | -1.201 | Destabilizing | 0.91 | D | 0.69 | prob.neutral | N | 0.439662941 | None | None | N |
A/H | 0.928 | likely_pathogenic | 0.9156 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
A/I | 0.6037 | likely_pathogenic | 0.5485 | ambiguous | 0.891 | Stabilizing | 0.991 | D | 0.752 | deleterious | None | None | None | None | N |
A/K | 0.9707 | likely_pathogenic | 0.9676 | pathogenic | -0.607 | Destabilizing | 0.97 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/L | 0.4751 | ambiguous | 0.4425 | ambiguous | 0.891 | Stabilizing | 0.97 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/M | 0.5581 | ambiguous | 0.5179 | ambiguous | 0.572 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/N | 0.8341 | likely_pathogenic | 0.8082 | pathogenic | -1.15 | Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
A/P | 0.9582 | likely_pathogenic | 0.9547 | pathogenic | 0.421 | Stabilizing | 0.994 | D | 0.75 | deleterious | N | 0.499711322 | None | None | N |
A/Q | 0.8918 | likely_pathogenic | 0.8823 | pathogenic | -0.765 | Destabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
A/R | 0.9507 | likely_pathogenic | 0.9442 | pathogenic | -1.101 | Destabilizing | 0.996 | D | 0.745 | deleterious | None | None | None | None | N |
A/S | 0.2038 | likely_benign | 0.1875 | benign | -1.496 | Destabilizing | 0.287 | N | 0.447 | neutral | N | 0.381729358 | None | None | N |
A/T | 0.1753 | likely_benign | 0.1436 | benign | -1.061 | Destabilizing | 0.248 | N | 0.573 | neutral | N | 0.340845528 | None | None | N |
A/V | 0.2928 | likely_benign | 0.2483 | benign | 0.421 | Stabilizing | 0.961 | D | 0.705 | prob.neutral | N | 0.474716877 | None | None | N |
A/W | 0.9789 | likely_pathogenic | 0.9753 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
A/Y | 0.902 | likely_pathogenic | 0.8885 | pathogenic | -0.564 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.