Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21239 | 63940;63941;63942 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
N2AB | 19598 | 59017;59018;59019 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
N2A | 18671 | 56236;56237;56238 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
N2B | 12174 | 36745;36746;36747 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
Novex-1 | 12299 | 37120;37121;37122 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
Novex-2 | 12366 | 37321;37322;37323 | chr2:178587594;178587593;178587592 | chr2:179452321;179452320;179452319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.619 | N | 0.268 | 0.069 | 0.204665344411 | gnomAD-4.0.0 | 1.59406E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86148E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1664 | likely_benign | 0.1791 | benign | -0.143 | Destabilizing | 0.992 | D | 0.651 | neutral | N | 0.471831287 | None | None | I |
D/C | 0.639 | likely_pathogenic | 0.6696 | pathogenic | 0.187 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
D/E | 0.1108 | likely_benign | 0.1265 | benign | -0.167 | Destabilizing | 0.619 | D | 0.268 | neutral | N | 0.409894607 | None | None | I |
D/F | 0.5722 | likely_pathogenic | 0.6211 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
D/G | 0.2087 | likely_benign | 0.2308 | benign | -0.288 | Destabilizing | 0.996 | D | 0.703 | prob.neutral | N | 0.483221717 | None | None | I |
D/H | 0.3341 | likely_benign | 0.3402 | ambiguous | -0.013 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.508773522 | None | None | I |
D/I | 0.3933 | ambiguous | 0.4301 | ambiguous | 0.175 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/K | 0.4565 | ambiguous | 0.4576 | ambiguous | 0.468 | Stabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | I |
D/L | 0.3645 | ambiguous | 0.3905 | ambiguous | 0.175 | Stabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
D/M | 0.545 | ambiguous | 0.604 | pathogenic | 0.294 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
D/N | 0.1116 | likely_benign | 0.1251 | benign | 0.311 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.457555268 | None | None | I |
D/P | 0.8619 | likely_pathogenic | 0.8837 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/Q | 0.3227 | likely_benign | 0.3354 | benign | 0.312 | Stabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | I |
D/R | 0.4992 | ambiguous | 0.5053 | ambiguous | 0.565 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
D/S | 0.1433 | likely_benign | 0.1581 | benign | 0.192 | Stabilizing | 0.994 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/T | 0.2418 | likely_benign | 0.2755 | benign | 0.301 | Stabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
D/V | 0.2375 | likely_benign | 0.2556 | benign | 0.09 | Stabilizing | 0.999 | D | 0.748 | deleterious | N | 0.512717905 | None | None | I |
D/W | 0.8652 | likely_pathogenic | 0.883 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
D/Y | 0.2302 | likely_benign | 0.2399 | benign | -0.05 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.452650881 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.