Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21249 | 63970;63971;63972 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
N2AB | 19608 | 59047;59048;59049 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
N2A | 18681 | 56266;56267;56268 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
N2B | 12184 | 36775;36776;36777 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
Novex-1 | 12309 | 37150;37151;37152 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
Novex-2 | 12376 | 37351;37352;37353 | chr2:178587564;178587563;178587562 | chr2:179452291;179452290;179452289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.826 | N | 0.443 | 0.178 | 0.52540932818 | gnomAD-4.0.0 | 1.36984E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79996E-06 | 0 | 0 |
V/M | None | None | 0.996 | N | 0.475 | 0.275 | 0.610882576163 | gnomAD-4.0.0 | 3.4246E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1461 | likely_benign | 0.1408 | benign | -1.238 | Destabilizing | 0.509 | D | 0.357 | neutral | N | 0.441109388 | None | None | I |
V/C | 0.5965 | likely_pathogenic | 0.6048 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
V/D | 0.3252 | likely_benign | 0.2768 | benign | -1.12 | Destabilizing | 0.939 | D | 0.563 | neutral | None | None | None | None | I |
V/E | 0.1856 | likely_benign | 0.1644 | benign | -1.189 | Destabilizing | 0.92 | D | 0.57 | neutral | N | 0.329189392 | None | None | I |
V/F | 0.2133 | likely_benign | 0.2057 | benign | -1.236 | Destabilizing | 0.997 | D | 0.468 | neutral | None | None | None | None | I |
V/G | 0.2058 | likely_benign | 0.1968 | benign | -1.469 | Destabilizing | 0.92 | D | 0.591 | neutral | N | 0.475819395 | None | None | I |
V/H | 0.4234 | ambiguous | 0.4109 | ambiguous | -1.02 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | I |
V/I | 0.0898 | likely_benign | 0.0917 | benign | -0.735 | Destabilizing | 0.863 | D | 0.421 | neutral | None | None | None | None | I |
V/K | 0.2703 | likely_benign | 0.2332 | benign | -0.949 | Destabilizing | 0.939 | D | 0.569 | neutral | None | None | None | None | I |
V/L | 0.1752 | likely_benign | 0.179 | benign | -0.735 | Destabilizing | 0.826 | D | 0.443 | neutral | N | 0.479723705 | None | None | I |
V/M | 0.1511 | likely_benign | 0.1502 | benign | -0.488 | Destabilizing | 0.996 | D | 0.475 | neutral | N | 0.487209824 | None | None | I |
V/N | 0.2254 | likely_benign | 0.2113 | benign | -0.675 | Destabilizing | 0.939 | D | 0.57 | neutral | None | None | None | None | I |
V/P | 0.8951 | likely_pathogenic | 0.8858 | pathogenic | -0.868 | Destabilizing | 0.991 | D | 0.55 | neutral | None | None | None | None | I |
V/Q | 0.1976 | likely_benign | 0.1863 | benign | -0.958 | Destabilizing | 0.991 | D | 0.556 | neutral | None | None | None | None | I |
V/R | 0.2668 | likely_benign | 0.2276 | benign | -0.37 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | I |
V/S | 0.1447 | likely_benign | 0.1374 | benign | -1.125 | Destabilizing | 0.2 | N | 0.302 | neutral | None | None | None | None | I |
V/T | 0.1306 | likely_benign | 0.1279 | benign | -1.096 | Destabilizing | 0.17 | N | 0.163 | neutral | None | None | None | None | I |
V/W | 0.8068 | likely_pathogenic | 0.8021 | pathogenic | -1.332 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
V/Y | 0.5348 | ambiguous | 0.5215 | ambiguous | -1.045 | Destabilizing | 0.997 | D | 0.462 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.