Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21250 | 63973;63974;63975 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
N2AB | 19609 | 59050;59051;59052 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
N2A | 18682 | 56269;56270;56271 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
N2B | 12185 | 36778;36779;36780 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
Novex-1 | 12310 | 37153;37154;37155 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
Novex-2 | 12377 | 37354;37355;37356 | chr2:178587561;178587560;178587559 | chr2:179452288;179452287;179452286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs773738001 | -0.404 | 1.0 | D | 0.717 | 0.541 | 0.336155897331 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.13289E-04 | None | 0 | None | 0 | 0 | 0 |
N/K | rs773738001 | -0.404 | 1.0 | D | 0.717 | 0.541 | 0.336155897331 | gnomAD-4.0.0 | 3.19096E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58534E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9638 | likely_pathogenic | 0.9669 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
N/C | 0.7771 | likely_pathogenic | 0.8135 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
N/D | 0.9744 | likely_pathogenic | 0.9716 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.602 | neutral | D | 0.535635958 | None | None | I |
N/E | 0.9942 | likely_pathogenic | 0.9943 | pathogenic | -0.791 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
N/F | 0.9958 | likely_pathogenic | 0.9961 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
N/G | 0.9072 | likely_pathogenic | 0.9089 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | I |
N/H | 0.8848 | likely_pathogenic | 0.8905 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.543651355 | None | None | I |
N/I | 0.9677 | likely_pathogenic | 0.9677 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.532548539 | None | None | I |
N/K | 0.9969 | likely_pathogenic | 0.997 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.554500681 | None | None | I |
N/L | 0.9223 | likely_pathogenic | 0.9251 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
N/M | 0.9684 | likely_pathogenic | 0.9695 | pathogenic | 0.6 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
N/P | 0.99 | likely_pathogenic | 0.9896 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
N/Q | 0.9917 | likely_pathogenic | 0.9923 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/R | 0.9959 | likely_pathogenic | 0.9959 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/S | 0.3412 | ambiguous | 0.3362 | benign | -0.767 | Destabilizing | 0.999 | D | 0.568 | neutral | N | 0.478992561 | None | None | I |
N/T | 0.7896 | likely_pathogenic | 0.7847 | pathogenic | -0.56 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | D | 0.535889447 | None | None | I |
N/V | 0.9668 | likely_pathogenic | 0.9704 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/W | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -0.53 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
N/Y | 0.9771 | likely_pathogenic | 0.9775 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.55500766 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.