Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21251 | 63976;63977;63978 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
N2AB | 19610 | 59053;59054;59055 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
N2A | 18683 | 56272;56273;56274 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
N2B | 12186 | 36781;36782;36783 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
Novex-1 | 12311 | 37156;37157;37158 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
Novex-2 | 12378 | 37357;37358;37359 | chr2:178587558;178587557;178587556 | chr2:179452285;179452284;179452283 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.001 | N | 0.134 | 0.146 | 0.195762928549 | gnomAD-4.0.0 | 6.85253E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00383E-07 | 0 | 0 |
P/S | None | None | 0.003 | N | 0.133 | 0.129 | 0.165133752707 | gnomAD-4.0.0 | 4.11152E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.4023E-06 | 0 | 0 |
P/T | None | None | 0.002 | N | 0.172 | 0.18 | 0.243398259712 | gnomAD-4.0.0 | 6.85253E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00383E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0756 | likely_benign | 0.0757 | benign | -0.288 | Destabilizing | 0.001 | N | 0.134 | neutral | N | 0.448920795 | None | None | I |
P/C | 0.5223 | ambiguous | 0.5042 | ambiguous | -0.649 | Destabilizing | 0.983 | D | 0.324 | neutral | None | None | None | None | I |
P/D | 0.3448 | ambiguous | 0.3176 | benign | -0.31 | Destabilizing | 0.418 | N | 0.291 | neutral | None | None | None | None | I |
P/E | 0.2296 | likely_benign | 0.2102 | benign | -0.437 | Destabilizing | 0.418 | N | 0.321 | neutral | None | None | None | None | I |
P/F | 0.5945 | likely_pathogenic | 0.5934 | pathogenic | -0.704 | Destabilizing | 0.557 | D | 0.336 | neutral | None | None | None | None | I |
P/G | 0.2535 | likely_benign | 0.2509 | benign | -0.356 | Destabilizing | 0.129 | N | 0.339 | neutral | None | None | None | None | I |
P/H | 0.235 | likely_benign | 0.2156 | benign | -0.019 | Destabilizing | 0.94 | D | 0.34 | neutral | None | None | None | None | I |
P/I | 0.3252 | likely_benign | 0.3053 | benign | -0.26 | Destabilizing | 0.264 | N | 0.345 | neutral | None | None | None | None | I |
P/K | 0.2831 | likely_benign | 0.2596 | benign | -0.319 | Destabilizing | 0.418 | N | 0.331 | neutral | None | None | None | None | I |
P/L | 0.1461 | likely_benign | 0.1405 | benign | -0.26 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.481398573 | None | None | I |
P/M | 0.2995 | likely_benign | 0.2941 | benign | -0.415 | Destabilizing | 0.716 | D | 0.341 | neutral | None | None | None | None | I |
P/N | 0.2848 | likely_benign | 0.2691 | benign | -0.071 | Destabilizing | 0.418 | N | 0.328 | neutral | None | None | None | None | I |
P/Q | 0.177 | likely_benign | 0.1673 | benign | -0.307 | Destabilizing | 0.794 | D | 0.319 | neutral | N | 0.487516469 | None | None | I |
P/R | 0.2256 | likely_benign | 0.2034 | benign | 0.144 | Stabilizing | 0.655 | D | 0.366 | neutral | N | 0.505120794 | None | None | I |
P/S | 0.1191 | likely_benign | 0.1157 | benign | -0.37 | Destabilizing | 0.003 | N | 0.133 | neutral | N | 0.410687694 | None | None | I |
P/T | 0.1009 | likely_benign | 0.0975 | benign | -0.404 | Destabilizing | 0.002 | N | 0.172 | neutral | N | 0.479435703 | None | None | I |
P/V | 0.1932 | likely_benign | 0.1871 | benign | -0.239 | Destabilizing | 0.129 | N | 0.342 | neutral | None | None | None | None | I |
P/W | 0.7218 | likely_pathogenic | 0.7028 | pathogenic | -0.779 | Destabilizing | 0.983 | D | 0.346 | neutral | None | None | None | None | I |
P/Y | 0.5118 | ambiguous | 0.4886 | ambiguous | -0.479 | Destabilizing | 0.836 | D | 0.337 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.