Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21254 | 63985;63986;63987 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
N2AB | 19613 | 59062;59063;59064 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
N2A | 18686 | 56281;56282;56283 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
N2B | 12189 | 36790;36791;36792 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
Novex-1 | 12314 | 37165;37166;37167 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
Novex-2 | 12381 | 37366;37367;37368 | chr2:178587549;178587548;178587547 | chr2:179452276;179452275;179452274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.955 | N | 0.603 | 0.345 | 0.309530620856 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3595 | ambiguous | 0.3576 | ambiguous | -0.229 | Destabilizing | 0.977 | D | 0.655 | neutral | N | 0.489570805 | None | None | I |
E/C | 0.9401 | likely_pathogenic | 0.9375 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/D | 0.3277 | likely_benign | 0.3396 | benign | -0.311 | Destabilizing | 0.977 | D | 0.48 | neutral | N | 0.496091718 | None | None | I |
E/F | 0.9428 | likely_pathogenic | 0.9401 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/G | 0.3838 | ambiguous | 0.3742 | ambiguous | -0.4 | Destabilizing | 0.993 | D | 0.646 | neutral | N | 0.494712593 | None | None | I |
E/H | 0.7248 | likely_pathogenic | 0.7089 | pathogenic | 0.224 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/I | 0.6855 | likely_pathogenic | 0.672 | pathogenic | 0.18 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/K | 0.282 | likely_benign | 0.2501 | benign | 0.508 | Stabilizing | 0.955 | D | 0.603 | neutral | N | 0.471720297 | None | None | I |
E/L | 0.759 | likely_pathogenic | 0.7501 | pathogenic | 0.18 | Stabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/M | 0.7049 | likely_pathogenic | 0.6941 | pathogenic | 0.15 | Stabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | I |
E/N | 0.5239 | ambiguous | 0.5324 | ambiguous | 0.127 | Stabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/P | 0.9234 | likely_pathogenic | 0.9307 | pathogenic | 0.064 | Stabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/Q | 0.1872 | likely_benign | 0.1827 | benign | 0.161 | Stabilizing | 0.568 | D | 0.299 | neutral | N | 0.51285763 | None | None | I |
E/R | 0.478 | ambiguous | 0.4449 | ambiguous | 0.698 | Stabilizing | 0.99 | D | 0.712 | prob.delet. | None | None | None | None | I |
E/S | 0.332 | likely_benign | 0.337 | benign | 0.008 | Stabilizing | 0.983 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/T | 0.3907 | ambiguous | 0.3899 | ambiguous | 0.156 | Stabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | I |
E/V | 0.4603 | ambiguous | 0.4444 | ambiguous | 0.064 | Stabilizing | 0.997 | D | 0.716 | prob.delet. | D | 0.529040591 | None | None | I |
E/W | 0.9778 | likely_pathogenic | 0.9746 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/Y | 0.8909 | likely_pathogenic | 0.8795 | pathogenic | 0.109 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.