Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21256 | 63991;63992;63993 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
N2AB | 19615 | 59068;59069;59070 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
N2A | 18688 | 56287;56288;56289 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
N2B | 12191 | 36796;36797;36798 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
Novex-1 | 12316 | 37171;37172;37173 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
Novex-2 | 12383 | 37372;37373;37374 | chr2:178587543;178587542;178587541 | chr2:179452270;179452269;179452268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1277491841 | -0.638 | 1.0 | N | 0.702 | 0.388 | 0.500176316166 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs1277491841 | -0.638 | 1.0 | N | 0.702 | 0.388 | 0.500176316166 | gnomAD-4.0.0 | 1.6E-06 | None | None | None | None | I | None | 0 | 2.30563E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6234 | likely_pathogenic | 0.6757 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/D | 0.6887 | likely_pathogenic | 0.7159 | pathogenic | -0.439 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.513894993 | None | None | I |
A/E | 0.5912 | likely_pathogenic | 0.6143 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
A/F | 0.7035 | likely_pathogenic | 0.7556 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
A/G | 0.2886 | likely_benign | 0.3231 | benign | -0.6 | Destabilizing | 1.0 | D | 0.555 | neutral | N | 0.485390068 | None | None | I |
A/H | 0.7306 | likely_pathogenic | 0.7586 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
A/I | 0.5799 | likely_pathogenic | 0.6262 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
A/K | 0.8099 | likely_pathogenic | 0.8324 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
A/L | 0.437 | ambiguous | 0.4782 | ambiguous | -0.134 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
A/M | 0.3836 | ambiguous | 0.4347 | ambiguous | -0.298 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
A/N | 0.4991 | ambiguous | 0.5759 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
A/P | 0.8046 | likely_pathogenic | 0.8398 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.485643558 | None | None | I |
A/Q | 0.5938 | likely_pathogenic | 0.6351 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
A/R | 0.7379 | likely_pathogenic | 0.7547 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
A/S | 0.1495 | likely_benign | 0.1629 | benign | -0.822 | Destabilizing | 1.0 | D | 0.553 | neutral | N | 0.379367496 | None | None | I |
A/T | 0.167 | likely_benign | 0.1909 | benign | -0.8 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.399625338 | None | None | I |
A/V | 0.2992 | likely_benign | 0.3327 | benign | -0.191 | Destabilizing | 1.0 | D | 0.618 | neutral | N | 0.499330973 | None | None | I |
A/W | 0.9273 | likely_pathogenic | 0.9445 | pathogenic | -0.926 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
A/Y | 0.7435 | likely_pathogenic | 0.7872 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.