Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21262 | 64009;64010;64011 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
N2AB | 19621 | 59086;59087;59088 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
N2A | 18694 | 56305;56306;56307 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
N2B | 12197 | 36814;36815;36816 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
Novex-1 | 12322 | 37189;37190;37191 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
Novex-2 | 12389 | 37390;37391;37392 | chr2:178587525;178587524;178587523 | chr2:179452252;179452251;179452250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.117 | N | 0.473 | 0.307 | 0.43923137753 | gnomAD-4.0.0 | 1.60277E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87829E-06 | 0 | 0 |
R/T | rs1342165359 | -0.254 | 0.117 | N | 0.448 | 0.145 | 0.331365685468 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 0 | 2.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/T | rs1342165359 | -0.254 | 0.117 | N | 0.448 | 0.145 | 0.331365685468 | gnomAD-4.0.0 | 1.60321E-06 | None | None | None | None | I | None | 0 | 2.31471E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5838 | likely_pathogenic | 0.6717 | pathogenic | -0.625 | Destabilizing | 0.035 | N | 0.45 | neutral | None | None | None | None | I |
R/C | 0.3053 | likely_benign | 0.3669 | ambiguous | -0.717 | Destabilizing | 0.935 | D | 0.537 | neutral | None | None | None | None | I |
R/D | 0.8393 | likely_pathogenic | 0.8692 | pathogenic | 0.12 | Stabilizing | 0.149 | N | 0.449 | neutral | None | None | None | None | I |
R/E | 0.5301 | ambiguous | 0.5891 | pathogenic | 0.25 | Stabilizing | 0.035 | N | 0.44 | neutral | None | None | None | None | I |
R/F | 0.811 | likely_pathogenic | 0.8529 | pathogenic | -0.533 | Destabilizing | 0.791 | D | 0.522 | neutral | None | None | None | None | I |
R/G | 0.5887 | likely_pathogenic | 0.6786 | pathogenic | -0.913 | Destabilizing | 0.117 | N | 0.473 | neutral | N | 0.499531077 | None | None | I |
R/H | 0.149 | likely_benign | 0.1667 | benign | -1.218 | Destabilizing | 0.555 | D | 0.441 | neutral | None | None | None | None | I |
R/I | 0.4385 | ambiguous | 0.48 | ambiguous | 0.137 | Stabilizing | 0.484 | N | 0.523 | neutral | D | 0.526920219 | None | None | I |
R/K | 0.0797 | likely_benign | 0.1001 | benign | -0.49 | Destabilizing | None | N | 0.131 | neutral | N | 0.429852245 | None | None | I |
R/L | 0.3697 | ambiguous | 0.4282 | ambiguous | 0.137 | Stabilizing | 0.149 | N | 0.473 | neutral | None | None | None | None | I |
R/M | 0.3832 | ambiguous | 0.4461 | ambiguous | -0.342 | Destabilizing | 0.791 | D | 0.445 | neutral | None | None | None | None | I |
R/N | 0.6998 | likely_pathogenic | 0.7654 | pathogenic | -0.21 | Destabilizing | 0.149 | N | 0.436 | neutral | None | None | None | None | I |
R/P | 0.9658 | likely_pathogenic | 0.9767 | pathogenic | -0.096 | Destabilizing | 0.555 | D | 0.463 | neutral | None | None | None | None | I |
R/Q | 0.1301 | likely_benign | 0.1456 | benign | -0.295 | Destabilizing | 0.081 | N | 0.487 | neutral | None | None | None | None | I |
R/S | 0.6618 | likely_pathogenic | 0.7313 | pathogenic | -0.924 | Destabilizing | 0.062 | N | 0.46 | neutral | N | 0.520127532 | None | None | I |
R/T | 0.3443 | ambiguous | 0.4143 | ambiguous | -0.609 | Destabilizing | 0.117 | N | 0.448 | neutral | N | 0.50365657 | None | None | I |
R/V | 0.4801 | ambiguous | 0.5403 | ambiguous | -0.096 | Destabilizing | 0.38 | N | 0.465 | neutral | None | None | None | None | I |
R/W | 0.4183 | ambiguous | 0.4708 | ambiguous | -0.298 | Destabilizing | 0.935 | D | 0.607 | neutral | None | None | None | None | I |
R/Y | 0.6673 | likely_pathogenic | 0.7237 | pathogenic | 0.024 | Stabilizing | 0.791 | D | 0.506 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.