Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21266 | 64021;64022;64023 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
N2AB | 19625 | 59098;59099;59100 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
N2A | 18698 | 56317;56318;56319 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
N2B | 12201 | 36826;36827;36828 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
Novex-1 | 12326 | 37201;37202;37203 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
Novex-2 | 12393 | 37402;37403;37404 | chr2:178587415;178587414;178587413 | chr2:179452142;179452141;179452140 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1453662624 | None | 0.997 | N | 0.488 | 0.221 | 0.137902524267 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1453662624 | None | 0.997 | N | 0.488 | 0.221 | 0.137902524267 | gnomAD-4.0.0 | 2.03051E-06 | None | None | None | None | I | None | 1.74948E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20504E-06 | 0 | 0 |
T/I | None | None | 0.999 | N | 0.669 | 0.302 | 0.280987212366 | gnomAD-4.0.0 | 2.061E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70524E-06 | 0 | 0 |
T/S | None | None | 0.997 | N | 0.567 | 0.137 | 0.132336055621 | gnomAD-4.0.0 | 6.87001E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01746E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1923 | likely_benign | 0.1899 | benign | -0.813 | Destabilizing | 0.997 | D | 0.488 | neutral | N | 0.474772805 | None | None | I |
T/C | 0.6346 | likely_pathogenic | 0.6515 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
T/D | 0.9116 | likely_pathogenic | 0.9073 | pathogenic | -0.167 | Destabilizing | 0.999 | D | 0.686 | prob.delet. | None | None | None | None | I |
T/E | 0.8129 | likely_pathogenic | 0.7927 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.687 | prob.delet. | None | None | None | None | I |
T/F | 0.7488 | likely_pathogenic | 0.7345 | pathogenic | -1.206 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
T/G | 0.5661 | likely_pathogenic | 0.5856 | pathogenic | -0.979 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | I |
T/H | 0.6824 | likely_pathogenic | 0.665 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
T/I | 0.4737 | ambiguous | 0.4523 | ambiguous | -0.476 | Destabilizing | 0.999 | D | 0.669 | prob.neutral | N | 0.483259002 | None | None | I |
T/K | 0.6045 | likely_pathogenic | 0.5303 | ambiguous | -0.555 | Destabilizing | 0.999 | D | 0.692 | prob.delet. | None | None | None | None | I |
T/L | 0.3088 | likely_benign | 0.2967 | benign | -0.476 | Destabilizing | 0.998 | D | 0.694 | prob.delet. | None | None | None | None | I |
T/M | 0.2044 | likely_benign | 0.2024 | benign | -0.011 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
T/N | 0.4166 | ambiguous | 0.4289 | ambiguous | -0.393 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.456248319 | None | None | I |
T/P | 0.3861 | ambiguous | 0.348 | ambiguous | -0.56 | Destabilizing | 0.999 | D | 0.639 | neutral | N | 0.450970439 | None | None | I |
T/Q | 0.5988 | likely_pathogenic | 0.57 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.667 | prob.neutral | None | None | None | None | I |
T/R | 0.5839 | likely_pathogenic | 0.5 | ambiguous | -0.254 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
T/S | 0.1665 | likely_benign | 0.1874 | benign | -0.672 | Destabilizing | 0.997 | D | 0.567 | neutral | N | 0.479834695 | None | None | I |
T/V | 0.2966 | likely_benign | 0.2827 | benign | -0.56 | Destabilizing | 0.998 | D | 0.654 | prob.neutral | None | None | None | None | I |
T/W | 0.9535 | likely_pathogenic | 0.9515 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.728 | deleterious | None | None | None | None | I |
T/Y | 0.7439 | likely_pathogenic | 0.7399 | pathogenic | -0.852 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.