Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21272 | 64039;64040;64041 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
N2AB | 19631 | 59116;59117;59118 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
N2A | 18704 | 56335;56336;56337 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
N2B | 12207 | 36844;36845;36846 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
Novex-1 | 12332 | 37219;37220;37221 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
Novex-2 | 12399 | 37420;37421;37422 | chr2:178587397;178587396;178587395 | chr2:179452124;179452123;179452122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | N | 0.119 | 0.066 | 0.101711395817 | gnomAD-4.0.0 | 6.85636E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00669E-07 | 0 | 0 |
D/Y | rs376015249 | 0.265 | 0.741 | N | 0.335 | 0.294 | 0.523754170085 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.2E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1312 | likely_benign | 0.159 | benign | -0.307 | Destabilizing | 0.027 | N | 0.275 | neutral | N | 0.467591408 | None | None | N |
D/C | 0.4235 | ambiguous | 0.4968 | ambiguous | 0.047 | Stabilizing | 0.935 | D | 0.326 | neutral | None | None | None | None | N |
D/E | 0.1142 | likely_benign | 0.1433 | benign | -0.316 | Destabilizing | None | N | 0.119 | neutral | N | 0.475768175 | None | None | N |
D/F | 0.4638 | ambiguous | 0.563 | ambiguous | -0.257 | Destabilizing | 0.555 | D | 0.342 | neutral | None | None | None | None | N |
D/G | 0.1295 | likely_benign | 0.1422 | benign | -0.496 | Destabilizing | None | N | 0.095 | neutral | N | 0.434593556 | None | None | N |
D/H | 0.1906 | likely_benign | 0.2353 | benign | -0.082 | Destabilizing | 0.317 | N | 0.376 | neutral | N | 0.478867195 | None | None | N |
D/I | 0.2782 | likely_benign | 0.3748 | ambiguous | 0.143 | Stabilizing | 0.235 | N | 0.359 | neutral | None | None | None | None | N |
D/K | 0.2893 | likely_benign | 0.3435 | ambiguous | 0.384 | Stabilizing | 0.081 | N | 0.3 | neutral | None | None | None | None | N |
D/L | 0.2698 | likely_benign | 0.3319 | benign | 0.143 | Stabilizing | 0.081 | N | 0.375 | neutral | None | None | None | None | N |
D/M | 0.4388 | ambiguous | 0.5362 | ambiguous | 0.279 | Stabilizing | 0.824 | D | 0.304 | neutral | None | None | None | None | N |
D/N | 0.0784 | likely_benign | 0.0847 | benign | 0.04 | Stabilizing | None | N | 0.161 | neutral | N | 0.396667099 | None | None | N |
D/P | 0.5457 | ambiguous | 0.6342 | pathogenic | 0.015 | Stabilizing | 0.555 | D | 0.403 | neutral | None | None | None | None | N |
D/Q | 0.2112 | likely_benign | 0.2622 | benign | 0.067 | Stabilizing | 0.235 | N | 0.359 | neutral | None | None | None | None | N |
D/R | 0.3173 | likely_benign | 0.3792 | ambiguous | 0.523 | Stabilizing | 0.38 | N | 0.349 | neutral | None | None | None | None | N |
D/S | 0.0961 | likely_benign | 0.1107 | benign | -0.049 | Destabilizing | 0.035 | N | 0.25 | neutral | None | None | None | None | N |
D/T | 0.1777 | likely_benign | 0.23 | benign | 0.102 | Stabilizing | 0.081 | N | 0.309 | neutral | None | None | None | None | N |
D/V | 0.1713 | likely_benign | 0.2283 | benign | 0.015 | Stabilizing | 0.002 | N | 0.27 | neutral | N | 0.492239137 | None | None | N |
D/W | 0.8181 | likely_pathogenic | 0.8691 | pathogenic | -0.12 | Destabilizing | 0.935 | D | 0.495 | neutral | None | None | None | None | N |
D/Y | 0.2035 | likely_benign | 0.2397 | benign | -0.016 | Destabilizing | 0.741 | D | 0.335 | neutral | N | 0.49274195 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.