Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21275 | 64048;64049;64050 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
N2AB | 19634 | 59125;59126;59127 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
N2A | 18707 | 56344;56345;56346 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
N2B | 12210 | 36853;36854;36855 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
Novex-1 | 12335 | 37228;37229;37230 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
Novex-2 | 12402 | 37429;37430;37431 | chr2:178587388;178587387;178587386 | chr2:179452115;179452114;179452113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2049255613 | None | 0.027 | N | 0.497 | 0.103 | 0.260735089382 | gnomAD-4.0.0 | 1.6062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44001E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2404 | likely_benign | 0.3196 | benign | -1.511 | Destabilizing | None | N | 0.187 | neutral | N | 0.486793245 | None | None | N |
V/C | 0.6836 | likely_pathogenic | 0.7624 | pathogenic | -1.219 | Destabilizing | 0.824 | D | 0.625 | neutral | None | None | None | None | N |
V/D | 0.8943 | likely_pathogenic | 0.9285 | pathogenic | -1.017 | Destabilizing | 0.317 | N | 0.695 | prob.neutral | D | 0.524323013 | None | None | N |
V/E | 0.8588 | likely_pathogenic | 0.8954 | pathogenic | -0.919 | Destabilizing | 0.149 | N | 0.619 | neutral | None | None | None | None | N |
V/F | 0.2867 | likely_benign | 0.3558 | ambiguous | -0.921 | Destabilizing | 0.484 | N | 0.623 | neutral | N | 0.475562748 | None | None | N |
V/G | 0.4497 | ambiguous | 0.5624 | ambiguous | -1.927 | Destabilizing | 0.062 | N | 0.611 | neutral | N | 0.502736038 | None | None | N |
V/H | 0.9179 | likely_pathogenic | 0.9456 | pathogenic | -1.354 | Destabilizing | 0.935 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/I | 0.0839 | likely_benign | 0.0883 | benign | -0.433 | Destabilizing | 0.052 | N | 0.575 | neutral | N | 0.505765795 | None | None | N |
V/K | 0.903 | likely_pathogenic | 0.9275 | pathogenic | -1.229 | Destabilizing | 0.149 | N | 0.624 | neutral | None | None | None | None | N |
V/L | 0.2809 | likely_benign | 0.3374 | benign | -0.433 | Destabilizing | 0.027 | N | 0.497 | neutral | N | 0.51590543 | None | None | N |
V/M | 0.2695 | likely_benign | 0.3354 | benign | -0.498 | Destabilizing | 0.555 | D | 0.548 | neutral | None | None | None | None | N |
V/N | 0.7661 | likely_pathogenic | 0.8401 | pathogenic | -1.235 | Destabilizing | 0.38 | N | 0.693 | prob.neutral | None | None | None | None | N |
V/P | 0.5 | ambiguous | 0.5823 | pathogenic | -0.758 | Destabilizing | 0.38 | N | 0.646 | neutral | None | None | None | None | N |
V/Q | 0.8578 | likely_pathogenic | 0.8951 | pathogenic | -1.213 | Destabilizing | 0.555 | D | 0.65 | neutral | None | None | None | None | N |
V/R | 0.8698 | likely_pathogenic | 0.9021 | pathogenic | -0.907 | Destabilizing | 0.38 | N | 0.693 | prob.neutral | None | None | None | None | N |
V/S | 0.5213 | ambiguous | 0.6306 | pathogenic | -1.907 | Destabilizing | 0.081 | N | 0.551 | neutral | None | None | None | None | N |
V/T | 0.3965 | ambiguous | 0.4847 | ambiguous | -1.66 | Destabilizing | 0.001 | N | 0.298 | neutral | None | None | None | None | N |
V/W | 0.9195 | likely_pathogenic | 0.9469 | pathogenic | -1.155 | Destabilizing | 0.935 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/Y | 0.7248 | likely_pathogenic | 0.805 | pathogenic | -0.827 | Destabilizing | 0.555 | D | 0.628 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.