Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21279 | 64060;64061;64062 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
N2AB | 19638 | 59137;59138;59139 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
N2A | 18711 | 56356;56357;56358 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
N2B | 12214 | 36865;36866;36867 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
Novex-1 | 12339 | 37240;37241;37242 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
Novex-2 | 12406 | 37441;37442;37443 | chr2:178587376;178587375;178587374 | chr2:179452103;179452102;179452101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1276354995 | -0.684 | 0.103 | N | 0.153 | 0.101 | 0.110078149338 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/S | rs1276354995 | -0.684 | 0.103 | N | 0.153 | 0.101 | 0.110078149338 | gnomAD-4.0.0 | 1.6145E-06 | None | None | None | None | N | None | 0 | 2.31342E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1887 | likely_benign | 0.2036 | benign | -0.458 | Destabilizing | 0.64 | D | 0.467 | neutral | N | 0.471501051 | None | None | N |
T/C | 0.5545 | ambiguous | 0.5833 | pathogenic | -0.559 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
T/D | 0.5233 | ambiguous | 0.5774 | pathogenic | -1.574 | Destabilizing | 0.851 | D | 0.423 | neutral | None | None | None | None | N |
T/E | 0.5315 | ambiguous | 0.5827 | pathogenic | -1.565 | Destabilizing | 0.919 | D | 0.416 | neutral | None | None | None | None | N |
T/F | 0.5727 | likely_pathogenic | 0.6227 | pathogenic | -0.82 | Destabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | N |
T/G | 0.252 | likely_benign | 0.271 | benign | -0.687 | Destabilizing | 0.851 | D | 0.431 | neutral | None | None | None | None | N |
T/H | 0.4159 | ambiguous | 0.459 | ambiguous | -1.177 | Destabilizing | 0.997 | D | 0.512 | neutral | None | None | None | None | N |
T/I | 0.5852 | likely_pathogenic | 0.6397 | pathogenic | 0.057 | Stabilizing | 0.984 | D | 0.429 | neutral | N | 0.498443624 | None | None | N |
T/K | 0.2636 | likely_benign | 0.2872 | benign | -0.707 | Destabilizing | 0.919 | D | 0.407 | neutral | None | None | None | None | N |
T/L | 0.1971 | likely_benign | 0.227 | benign | 0.057 | Stabilizing | 0.919 | D | 0.414 | neutral | None | None | None | None | N |
T/M | 0.1587 | likely_benign | 0.1848 | benign | 0.495 | Stabilizing | 0.999 | D | 0.441 | neutral | None | None | None | None | N |
T/N | 0.1568 | likely_benign | 0.1774 | benign | -0.998 | Destabilizing | 0.103 | N | 0.271 | neutral | N | 0.4864866 | None | None | N |
T/P | 0.7498 | likely_pathogenic | 0.7694 | pathogenic | -0.084 | Destabilizing | 0.984 | D | 0.431 | neutral | N | 0.494658189 | None | None | N |
T/Q | 0.2824 | likely_benign | 0.3095 | benign | -1.27 | Destabilizing | 0.988 | D | 0.442 | neutral | None | None | None | None | N |
T/R | 0.2565 | likely_benign | 0.2748 | benign | -0.425 | Destabilizing | 0.976 | D | 0.435 | neutral | None | None | None | None | N |
T/S | 0.1159 | likely_benign | 0.1252 | benign | -0.994 | Destabilizing | 0.103 | N | 0.153 | neutral | N | 0.472959943 | None | None | N |
T/V | 0.3965 | ambiguous | 0.4387 | ambiguous | -0.084 | Destabilizing | 0.919 | D | 0.435 | neutral | None | None | None | None | N |
T/W | 0.84 | likely_pathogenic | 0.8642 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
T/Y | 0.5855 | likely_pathogenic | 0.6365 | pathogenic | -0.538 | Destabilizing | 0.996 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.