Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21283 | 64072;64073;64074 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
N2AB | 19642 | 59149;59150;59151 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
N2A | 18715 | 56368;56369;56370 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
N2B | 12218 | 36877;36878;36879 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
Novex-1 | 12343 | 37252;37253;37254 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
Novex-2 | 12410 | 37453;37454;37455 | chr2:178587364;178587363;178587362 | chr2:179452091;179452090;179452089 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1375757273 | -1.649 | 0.994 | N | 0.819 | 0.451 | 0.800807230783 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
C/R | rs1375757273 | -1.649 | 0.994 | N | 0.819 | 0.451 | 0.800807230783 | gnomAD-4.0.0 | 1.59512E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4353E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3576 | ambiguous | 0.4181 | ambiguous | -1.559 | Destabilizing | 0.055 | N | 0.233 | neutral | None | None | None | None | N |
C/D | 0.9979 | likely_pathogenic | 0.9984 | pathogenic | -1.801 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
C/E | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -1.576 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
C/F | 0.7692 | likely_pathogenic | 0.8116 | pathogenic | -1.17 | Destabilizing | 0.998 | D | 0.805 | deleterious | N | 0.513358197 | None | None | N |
C/G | 0.4241 | ambiguous | 0.501 | ambiguous | -1.902 | Destabilizing | 0.959 | D | 0.713 | prob.delet. | N | 0.477744205 | None | None | N |
C/H | 0.9928 | likely_pathogenic | 0.9944 | pathogenic | -2.364 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
C/I | 0.6149 | likely_pathogenic | 0.6607 | pathogenic | -0.646 | Destabilizing | 0.984 | D | 0.791 | deleterious | None | None | None | None | N |
C/K | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -1.184 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
C/L | 0.6042 | likely_pathogenic | 0.654 | pathogenic | -0.646 | Destabilizing | 0.927 | D | 0.686 | prob.neutral | None | None | None | None | N |
C/M | 0.8305 | likely_pathogenic | 0.8568 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
C/N | 0.9873 | likely_pathogenic | 0.9897 | pathogenic | -1.804 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
C/P | 0.9975 | likely_pathogenic | 0.9984 | pathogenic | -0.927 | Destabilizing | 0.995 | D | 0.813 | deleterious | None | None | None | None | N |
C/Q | 0.9934 | likely_pathogenic | 0.9948 | pathogenic | -1.362 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
C/R | 0.9901 | likely_pathogenic | 0.9922 | pathogenic | -1.621 | Destabilizing | 0.994 | D | 0.819 | deleterious | N | 0.49584846 | None | None | N |
C/S | 0.5905 | likely_pathogenic | 0.6497 | pathogenic | -2.032 | Highly Destabilizing | 0.828 | D | 0.69 | prob.neutral | N | 0.46136147 | None | None | N |
C/T | 0.7133 | likely_pathogenic | 0.7669 | pathogenic | -1.625 | Destabilizing | 0.969 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/V | 0.4117 | ambiguous | 0.4572 | ambiguous | -0.927 | Destabilizing | 0.927 | D | 0.703 | prob.neutral | None | None | None | None | N |
C/W | 0.9856 | likely_pathogenic | 0.9895 | pathogenic | -1.648 | Destabilizing | 0.999 | D | 0.757 | deleterious | N | 0.49584846 | None | None | N |
C/Y | 0.9511 | likely_pathogenic | 0.9624 | pathogenic | -1.375 | Destabilizing | 0.998 | D | 0.791 | deleterious | N | 0.484238665 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.