Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21284 | 64075;64076;64077 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
N2AB | 19643 | 59152;59153;59154 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
N2A | 18716 | 56371;56372;56373 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
N2B | 12219 | 36880;36881;36882 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
Novex-1 | 12344 | 37255;37256;37257 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
Novex-2 | 12411 | 37456;37457;37458 | chr2:178587361;178587360;178587359 | chr2:179452088;179452087;179452086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs769740117 | -0.96 | 0.669 | N | 0.425 | 0.279 | 0.273503213844 | gnomAD-2.1.1 | 1.63E-05 | None | None | None | None | N | None | 0 | 0 | None | 1.0008E-04 | 0 | None | 0 | None | 0 | 2.7E-05 | 0 |
H/R | rs769740117 | -0.96 | 0.669 | N | 0.425 | 0.279 | 0.273503213844 | gnomAD-4.0.0 | 6.43781E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.33313E-05 | 0 | None | 0 | 0 | 7.46118E-06 | 0 | 0 |
H/Y | None | None | 0.961 | N | 0.437 | 0.3 | 0.326074293725 | gnomAD-4.0.0 | 1.5952E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4353E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1853 | likely_benign | 0.2272 | benign | -0.715 | Destabilizing | 0.688 | D | 0.479 | neutral | None | None | None | None | N |
H/C | 0.1371 | likely_benign | 0.1503 | benign | -0.093 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
H/D | 0.2385 | likely_benign | 0.2757 | benign | -0.481 | Destabilizing | 0.801 | D | 0.481 | neutral | N | 0.443733114 | None | None | N |
H/E | 0.2367 | likely_benign | 0.2786 | benign | -0.419 | Destabilizing | 0.525 | D | 0.345 | neutral | None | None | None | None | N |
H/F | 0.1848 | likely_benign | 0.1957 | benign | -0.064 | Destabilizing | 0.991 | D | 0.54 | neutral | None | None | None | None | N |
H/G | 0.2812 | likely_benign | 0.3307 | benign | -1.032 | Destabilizing | 0.842 | D | 0.528 | neutral | None | None | None | None | N |
H/I | 0.1679 | likely_benign | 0.2004 | benign | 0.138 | Stabilizing | 0.974 | D | 0.619 | neutral | None | None | None | None | N |
H/K | 0.1885 | likely_benign | 0.209 | benign | -0.624 | Destabilizing | 0.525 | D | 0.47 | neutral | None | None | None | None | N |
H/L | 0.0805 | likely_benign | 0.0937 | benign | 0.138 | Stabilizing | 0.801 | D | 0.521 | neutral | N | 0.411716696 | None | None | N |
H/M | 0.2589 | likely_benign | 0.3017 | benign | 0.082 | Stabilizing | 0.974 | D | 0.603 | neutral | None | None | None | None | N |
H/N | 0.0987 | likely_benign | 0.1144 | benign | -0.508 | Destabilizing | 0.801 | D | 0.457 | neutral | N | 0.384935526 | None | None | N |
H/P | 0.583 | likely_pathogenic | 0.6445 | pathogenic | -0.124 | Destabilizing | 0.966 | D | 0.579 | neutral | N | 0.492295065 | None | None | N |
H/Q | 0.119 | likely_benign | 0.1355 | benign | -0.358 | Destabilizing | 0.007 | N | 0.223 | neutral | N | 0.370870151 | None | None | N |
H/R | 0.0919 | likely_benign | 0.0973 | benign | -0.882 | Destabilizing | 0.669 | D | 0.425 | neutral | N | 0.414044925 | None | None | N |
H/S | 0.1556 | likely_benign | 0.1851 | benign | -0.617 | Destabilizing | 0.842 | D | 0.487 | neutral | None | None | None | None | N |
H/T | 0.1477 | likely_benign | 0.1793 | benign | -0.463 | Destabilizing | 0.842 | D | 0.507 | neutral | None | None | None | None | N |
H/V | 0.1407 | likely_benign | 0.1669 | benign | -0.124 | Destabilizing | 0.915 | D | 0.537 | neutral | None | None | None | None | N |
H/W | 0.3167 | likely_benign | 0.3149 | benign | 0.057 | Stabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
H/Y | 0.0922 | likely_benign | 0.0916 | benign | 0.364 | Stabilizing | 0.961 | D | 0.437 | neutral | N | 0.437980578 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.