Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21298 | 64117;64118;64119 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
N2AB | 19657 | 59194;59195;59196 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
N2A | 18730 | 56413;56414;56415 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
N2B | 12233 | 36922;36923;36924 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
Novex-1 | 12358 | 37297;37298;37299 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
Novex-2 | 12425 | 37498;37499;37500 | chr2:178587319;178587318;178587317 | chr2:179452046;179452045;179452044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1236931080 | -0.511 | 0.997 | N | 0.717 | 0.379 | 0.614204031915 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
V/M | rs1236931080 | -0.511 | 0.997 | N | 0.717 | 0.379 | 0.614204031915 | gnomAD-4.0.0 | 2.73829E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69918E-06 | 0 | 1.65799E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8397 | likely_pathogenic | 0.8746 | pathogenic | -1.953 | Destabilizing | 0.948 | D | 0.619 | neutral | N | 0.480411367 | None | None | N |
V/C | 0.9249 | likely_pathogenic | 0.945 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/D | 0.9907 | likely_pathogenic | 0.9922 | pathogenic | -2.514 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/E | 0.9725 | likely_pathogenic | 0.9767 | pathogenic | -2.438 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.506366435 | None | None | N |
V/F | 0.8394 | likely_pathogenic | 0.8708 | pathogenic | -1.429 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
V/G | 0.8983 | likely_pathogenic | 0.9157 | pathogenic | -2.357 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.506112945 | None | None | N |
V/H | 0.9911 | likely_pathogenic | 0.994 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/I | 0.074 | likely_benign | 0.0764 | benign | -0.89 | Destabilizing | 0.246 | N | 0.221 | neutral | None | None | None | None | N |
V/K | 0.9822 | likely_pathogenic | 0.9847 | pathogenic | -1.732 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/L | 0.3876 | ambiguous | 0.4727 | ambiguous | -0.89 | Destabilizing | 0.9 | D | 0.439 | neutral | N | 0.492564424 | None | None | N |
V/M | 0.5112 | ambiguous | 0.5816 | pathogenic | -0.665 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | N | 0.505352476 | None | None | N |
V/N | 0.9514 | likely_pathogenic | 0.9621 | pathogenic | -1.706 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/P | 0.7996 | likely_pathogenic | 0.8354 | pathogenic | -1.213 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.9735 | likely_pathogenic | 0.9796 | pathogenic | -1.793 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/R | 0.9771 | likely_pathogenic | 0.98 | pathogenic | -1.252 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
V/S | 0.9384 | likely_pathogenic | 0.9514 | pathogenic | -2.2 | Highly Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
V/T | 0.8357 | likely_pathogenic | 0.8687 | pathogenic | -2.014 | Highly Destabilizing | 0.992 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.9944 | likely_pathogenic | 0.9965 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Y | 0.9737 | likely_pathogenic | 0.9806 | pathogenic | -1.506 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.