Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21309 | 64150;64151;64152 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
N2AB | 19668 | 59227;59228;59229 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
N2A | 18741 | 56446;56447;56448 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
N2B | 12244 | 36955;36956;36957 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
Novex-1 | 12369 | 37330;37331;37332 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
Novex-2 | 12436 | 37531;37532;37533 | chr2:178587286;178587285;178587284 | chr2:179452013;179452012;179452011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.931 | N | 0.363 | 0.297 | 0.335910606209 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1718 | likely_benign | 0.1567 | benign | -0.071 | Destabilizing | 0.002 | N | 0.316 | neutral | N | 0.499319825 | None | None | N |
D/C | 0.6273 | likely_pathogenic | 0.5971 | pathogenic | -0.031 | Destabilizing | 0.947 | D | 0.643 | neutral | None | None | None | None | N |
D/E | 0.1329 | likely_benign | 0.1245 | benign | -0.266 | Destabilizing | 0.002 | N | 0.252 | neutral | N | 0.486889245 | None | None | N |
D/F | 0.6221 | likely_pathogenic | 0.6018 | pathogenic | -0.143 | Destabilizing | 0.826 | D | 0.602 | neutral | None | None | None | None | N |
D/G | 0.1609 | likely_benign | 0.1432 | benign | -0.208 | Destabilizing | 0.201 | N | 0.31 | neutral | N | 0.437132429 | None | None | N |
D/H | 0.3758 | ambiguous | 0.3285 | benign | 0.315 | Stabilizing | 0.931 | D | 0.363 | neutral | N | 0.474664148 | None | None | N |
D/I | 0.396 | ambiguous | 0.3707 | ambiguous | 0.228 | Stabilizing | 0.7 | D | 0.606 | neutral | None | None | None | None | N |
D/K | 0.4517 | ambiguous | 0.3942 | ambiguous | 0.402 | Stabilizing | 0.25 | N | 0.287 | neutral | None | None | None | None | N |
D/L | 0.3611 | ambiguous | 0.3207 | benign | 0.228 | Stabilizing | 0.539 | D | 0.599 | neutral | None | None | None | None | N |
D/M | 0.5755 | likely_pathogenic | 0.5485 | ambiguous | 0.147 | Stabilizing | 0.982 | D | 0.631 | neutral | None | None | None | None | N |
D/N | 0.1252 | likely_benign | 0.1194 | benign | 0.211 | Stabilizing | 0.638 | D | 0.278 | neutral | N | 0.508685883 | None | None | N |
D/P | 0.7229 | likely_pathogenic | 0.6864 | pathogenic | 0.149 | Stabilizing | 0.826 | D | 0.361 | neutral | None | None | None | None | N |
D/Q | 0.3518 | ambiguous | 0.3044 | benign | 0.206 | Stabilizing | 0.539 | D | 0.303 | neutral | None | None | None | None | N |
D/R | 0.518 | ambiguous | 0.459 | ambiguous | 0.618 | Stabilizing | 0.539 | D | 0.51 | neutral | None | None | None | None | N |
D/S | 0.1276 | likely_benign | 0.1196 | benign | 0.092 | Stabilizing | 0.25 | N | 0.273 | neutral | None | None | None | None | N |
D/T | 0.2193 | likely_benign | 0.2093 | benign | 0.197 | Stabilizing | 0.7 | D | 0.307 | neutral | None | None | None | None | N |
D/V | 0.2481 | likely_benign | 0.2285 | benign | 0.149 | Stabilizing | 0.468 | N | 0.568 | neutral | N | 0.516020074 | None | None | N |
D/W | 0.8771 | likely_pathogenic | 0.8541 | pathogenic | -0.079 | Destabilizing | 0.982 | D | 0.671 | neutral | None | None | None | None | N |
D/Y | 0.3408 | ambiguous | 0.3067 | benign | 0.087 | Stabilizing | 0.976 | D | 0.6 | neutral | N | 0.488248953 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.