Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21311 | 64156;64157;64158 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
N2AB | 19670 | 59233;59234;59235 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
N2A | 18743 | 56452;56453;56454 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
N2B | 12246 | 36961;36962;36963 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
Novex-1 | 12371 | 37336;37337;37338 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
Novex-2 | 12438 | 37537;37538;37539 | chr2:178587280;178587279;178587278 | chr2:179452007;179452006;179452005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs375535453 | None | 0.999 | N | 0.592 | 0.309 | None | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | N | None | 5.66701E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8394 | likely_pathogenic | 0.8226 | pathogenic | -0.016 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
K/C | 0.9131 | likely_pathogenic | 0.9057 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.9415 | likely_pathogenic | 0.9313 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
K/E | 0.7492 | likely_pathogenic | 0.7197 | pathogenic | -0.273 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.478477619 | None | None | N |
K/F | 0.9587 | likely_pathogenic | 0.9596 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/G | 0.8593 | likely_pathogenic | 0.8212 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/H | 0.628 | likely_pathogenic | 0.5938 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/I | 0.8263 | likely_pathogenic | 0.8417 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/L | 0.7196 | likely_pathogenic | 0.7229 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/M | 0.6088 | likely_pathogenic | 0.6208 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.500010471 | None | None | N |
K/N | 0.872 | likely_pathogenic | 0.8645 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.662 | neutral | N | 0.481133922 | None | None | N |
K/P | 0.895 | likely_pathogenic | 0.889 | pathogenic | 0.148 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
K/Q | 0.385 | ambiguous | 0.3583 | ambiguous | -0.189 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.505722935 | None | None | N |
K/R | 0.1115 | likely_benign | 0.1072 | benign | -0.144 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.457721132 | None | None | N |
K/S | 0.891 | likely_pathogenic | 0.8764 | pathogenic | -0.422 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
K/T | 0.7001 | likely_pathogenic | 0.6936 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.470957001 | None | None | N |
K/V | 0.7739 | likely_pathogenic | 0.7862 | pathogenic | 0.148 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.9442 | likely_pathogenic | 0.938 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/Y | 0.9023 | likely_pathogenic | 0.8939 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.