Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21315 | 64168;64169;64170 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
N2AB | 19674 | 59245;59246;59247 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
N2A | 18747 | 56464;56465;56466 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
N2B | 12250 | 36973;36974;36975 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
Novex-1 | 12375 | 37348;37349;37350 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
Novex-2 | 12442 | 37549;37550;37551 | chr2:178587268;178587267;178587266 | chr2:179451995;179451994;179451993 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs747246624 | -0.671 | 0.006 | N | 0.2 | 0.085 | 0.17948927462 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/N | rs747246624 | -0.671 | 0.006 | N | 0.2 | 0.085 | 0.17948927462 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96747E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs747246624 | -0.671 | 0.006 | N | 0.2 | 0.085 | 0.17948927462 | gnomAD-4.0.0 | 5.57954E-06 | None | None | None | None | N | None | 0 | 6.67334E-05 | None | 0 | 0 | None | 0 | 0 | 4.23912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0764 | likely_benign | 0.0701 | benign | -0.722 | Destabilizing | 0.09 | N | 0.333 | neutral | N | 0.496951523 | None | None | N |
T/C | 0.3336 | likely_benign | 0.302 | benign | -0.458 | Destabilizing | 0.944 | D | 0.513 | neutral | None | None | None | None | N |
T/D | 0.5985 | likely_pathogenic | 0.5293 | ambiguous | -0.178 | Destabilizing | 0.241 | N | 0.437 | neutral | None | None | None | None | N |
T/E | 0.4735 | ambiguous | 0.411 | ambiguous | -0.199 | Destabilizing | 0.388 | N | 0.447 | neutral | None | None | None | None | N |
T/F | 0.2938 | likely_benign | 0.2593 | benign | -0.85 | Destabilizing | 0.69 | D | 0.537 | neutral | None | None | None | None | N |
T/G | 0.292 | likely_benign | 0.2579 | benign | -0.957 | Destabilizing | 0.388 | N | 0.463 | neutral | None | None | None | None | N |
T/H | 0.3436 | ambiguous | 0.2974 | benign | -1.256 | Destabilizing | 0.818 | D | 0.521 | neutral | None | None | None | None | N |
T/I | 0.1384 | likely_benign | 0.1202 | benign | -0.196 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.507419233 | None | None | N |
T/K | 0.3186 | likely_benign | 0.2707 | benign | -0.756 | Destabilizing | 0.004 | N | 0.217 | neutral | None | None | None | None | N |
T/L | 0.0878 | likely_benign | 0.0771 | benign | -0.196 | Destabilizing | 0.043 | N | 0.45 | neutral | None | None | None | None | N |
T/M | 0.0876 | likely_benign | 0.0838 | benign | 0.081 | Stabilizing | 0.69 | D | 0.533 | neutral | None | None | None | None | N |
T/N | 0.1581 | likely_benign | 0.135 | benign | -0.623 | Destabilizing | 0.006 | N | 0.2 | neutral | N | 0.485638452 | None | None | N |
T/P | 0.1102 | likely_benign | 0.0988 | benign | -0.339 | Destabilizing | 0.912 | D | 0.545 | neutral | N | 0.465687254 | None | None | N |
T/Q | 0.2967 | likely_benign | 0.2532 | benign | -0.818 | Destabilizing | 0.69 | D | 0.547 | neutral | None | None | None | None | N |
T/R | 0.267 | likely_benign | 0.2256 | benign | -0.487 | Destabilizing | 0.241 | N | 0.499 | neutral | None | None | None | None | N |
T/S | 0.1269 | likely_benign | 0.1139 | benign | -0.884 | Destabilizing | 0.165 | N | 0.364 | neutral | N | 0.505338933 | None | None | N |
T/V | 0.1011 | likely_benign | 0.0879 | benign | -0.339 | Destabilizing | 0.002 | N | 0.132 | neutral | None | None | None | None | N |
T/W | 0.6819 | likely_pathogenic | 0.6542 | pathogenic | -0.787 | Destabilizing | 0.981 | D | 0.552 | neutral | None | None | None | None | N |
T/Y | 0.352 | ambiguous | 0.3116 | benign | -0.563 | Destabilizing | 0.818 | D | 0.54 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.