Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21317 | 64174;64175;64176 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
N2AB | 19676 | 59251;59252;59253 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
N2A | 18749 | 56470;56471;56472 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
N2B | 12252 | 36979;36980;36981 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
Novex-1 | 12377 | 37354;37355;37356 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
Novex-2 | 12444 | 37555;37556;37557 | chr2:178587262;178587261;178587260 | chr2:179451989;179451988;179451987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.303 | 0.071 | 0.187945064343 | gnomAD-4.0.0 | 1.59254E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0846 | likely_benign | 0.097 | benign | -0.695 | Destabilizing | None | N | 0.201 | neutral | N | 0.454414254 | None | None | N |
T/C | 0.2876 | likely_benign | 0.3342 | benign | -0.472 | Destabilizing | 0.824 | D | 0.456 | neutral | None | None | None | None | N |
T/D | 0.4792 | ambiguous | 0.5354 | ambiguous | 0.088 | Stabilizing | 0.081 | N | 0.459 | neutral | None | None | None | None | N |
T/E | 0.3993 | ambiguous | 0.4931 | ambiguous | 0.161 | Stabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | N |
T/F | 0.2197 | likely_benign | 0.2776 | benign | -0.737 | Destabilizing | 0.38 | N | 0.507 | neutral | None | None | None | None | N |
T/G | 0.287 | likely_benign | 0.3056 | benign | -1.0 | Destabilizing | 0.081 | N | 0.448 | neutral | None | None | None | None | N |
T/H | 0.2705 | likely_benign | 0.3239 | benign | -1.174 | Destabilizing | 0.003 | N | 0.43 | neutral | None | None | None | None | N |
T/I | 0.1293 | likely_benign | 0.1639 | benign | 0.038 | Stabilizing | None | N | 0.303 | neutral | N | 0.499415825 | None | None | N |
T/K | 0.2892 | likely_benign | 0.3554 | ambiguous | -0.347 | Destabilizing | 0.081 | N | 0.46 | neutral | None | None | None | None | N |
T/L | 0.0848 | likely_benign | 0.1005 | benign | 0.038 | Stabilizing | 0.035 | N | 0.424 | neutral | None | None | None | None | N |
T/M | 0.0785 | likely_benign | 0.0963 | benign | -0.019 | Destabilizing | 0.38 | N | 0.476 | neutral | None | None | None | None | N |
T/N | 0.1288 | likely_benign | 0.1424 | benign | -0.593 | Destabilizing | None | N | 0.285 | neutral | N | 0.445253267 | None | None | N |
T/P | 0.4099 | ambiguous | 0.4491 | ambiguous | -0.173 | Destabilizing | 0.317 | N | 0.492 | neutral | N | 0.491124416 | None | None | N |
T/Q | 0.2642 | likely_benign | 0.3257 | benign | -0.54 | Destabilizing | 0.38 | N | 0.488 | neutral | None | None | None | None | N |
T/R | 0.2729 | likely_benign | 0.3427 | ambiguous | -0.329 | Destabilizing | 0.38 | N | 0.493 | neutral | None | None | None | None | N |
T/S | 0.1042 | likely_benign | 0.1092 | benign | -0.894 | Destabilizing | None | N | 0.179 | neutral | N | 0.456027621 | None | None | N |
T/V | 0.1113 | likely_benign | 0.1337 | benign | -0.173 | Destabilizing | 0.035 | N | 0.427 | neutral | None | None | None | None | N |
T/W | 0.6176 | likely_pathogenic | 0.6979 | pathogenic | -0.773 | Destabilizing | 0.935 | D | 0.518 | neutral | None | None | None | None | N |
T/Y | 0.3041 | likely_benign | 0.3645 | ambiguous | -0.444 | Destabilizing | 0.235 | N | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.