Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2132 | 6619;6620;6621 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
N2AB | 2132 | 6619;6620;6621 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
N2A | 2132 | 6619;6620;6621 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
N2B | 2086 | 6481;6482;6483 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
Novex-1 | 2086 | 6481;6482;6483 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
Novex-2 | 2086 | 6481;6482;6483 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
Novex-3 | 2132 | 6619;6620;6621 | chr2:178775470;178775469;178775468 | chr2:179640197;179640196;179640195 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.121 | N | 0.347 | 0.193 | 0.224531998449 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4777 | ambiguous | 0.5225 | ambiguous | -0.805 | Destabilizing | 0.992 | D | 0.659 | neutral | None | None | None | None | N |
N/C | 0.5156 | ambiguous | 0.5433 | ambiguous | 0.041 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
N/D | 0.3252 | likely_benign | 0.3465 | ambiguous | -0.46 | Destabilizing | 0.989 | D | 0.588 | neutral | N | 0.493547909 | None | None | N |
N/E | 0.7492 | likely_pathogenic | 0.7782 | pathogenic | -0.316 | Destabilizing | 0.983 | D | 0.604 | neutral | None | None | None | None | N |
N/F | 0.7816 | likely_pathogenic | 0.806 | pathogenic | -0.466 | Destabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
N/G | 0.4106 | ambiguous | 0.452 | ambiguous | -1.175 | Destabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | N |
N/H | 0.1763 | likely_benign | 0.187 | benign | -0.793 | Destabilizing | 0.121 | N | 0.347 | neutral | N | 0.512060069 | None | None | N |
N/I | 0.7105 | likely_pathogenic | 0.7341 | pathogenic | 0.154 | Stabilizing | 0.999 | D | 0.787 | deleterious | D | 0.593960116 | None | None | N |
N/K | 0.6732 | likely_pathogenic | 0.6857 | pathogenic | -0.146 | Destabilizing | 0.978 | D | 0.633 | neutral | N | 0.507511425 | None | None | N |
N/L | 0.5401 | ambiguous | 0.56 | ambiguous | 0.154 | Stabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
N/M | 0.6188 | likely_pathogenic | 0.6454 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
N/P | 0.94 | likely_pathogenic | 0.9504 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
N/Q | 0.5674 | likely_pathogenic | 0.6057 | pathogenic | -0.613 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/R | 0.6215 | likely_pathogenic | 0.6376 | pathogenic | -0.271 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/S | 0.1142 | likely_benign | 0.1201 | benign | -0.857 | Destabilizing | 0.989 | D | 0.571 | neutral | N | 0.498490791 | None | None | N |
N/T | 0.3204 | likely_benign | 0.3414 | ambiguous | -0.511 | Destabilizing | 0.989 | D | 0.659 | neutral | N | 0.50945732 | None | None | N |
N/V | 0.6835 | likely_pathogenic | 0.7091 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
N/W | 0.9119 | likely_pathogenic | 0.9278 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/Y | 0.3517 | ambiguous | 0.3712 | ambiguous | -0.016 | Destabilizing | 0.994 | D | 0.769 | deleterious | D | 0.593291149 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.