Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21320 | 64183;64184;64185 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
N2AB | 19679 | 59260;59261;59262 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
N2A | 18752 | 56479;56480;56481 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
N2B | 12255 | 36988;36989;36990 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
Novex-1 | 12380 | 37363;37364;37365 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
Novex-2 | 12447 | 37564;37565;37566 | chr2:178587253;178587252;178587251 | chr2:179451980;179451979;179451978 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1391961296 | None | 0.934 | N | 0.611 | 0.254 | 0.574945690627 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/F | rs1391961296 | None | 0.934 | N | 0.611 | 0.254 | 0.574945690627 | gnomAD-4.0.0 | 6.57869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47119E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2557 | likely_benign | 0.2769 | benign | -1.752 | Destabilizing | 0.625 | D | 0.409 | neutral | N | 0.507472374 | None | None | N |
V/C | 0.6271 | likely_pathogenic | 0.6501 | pathogenic | -1.039 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
V/D | 0.7765 | likely_pathogenic | 0.782 | pathogenic | -2.641 | Highly Destabilizing | 0.934 | D | 0.631 | neutral | N | 0.473290888 | None | None | N |
V/E | 0.6275 | likely_pathogenic | 0.6511 | pathogenic | -2.37 | Highly Destabilizing | 0.728 | D | 0.569 | neutral | None | None | None | None | N |
V/F | 0.3629 | ambiguous | 0.4014 | ambiguous | -1.008 | Destabilizing | 0.934 | D | 0.611 | neutral | N | 0.479913933 | None | None | N |
V/G | 0.3379 | likely_benign | 0.3392 | benign | -2.309 | Highly Destabilizing | 0.891 | D | 0.609 | neutral | N | 0.492425564 | None | None | N |
V/H | 0.8315 | likely_pathogenic | 0.852 | pathogenic | -2.322 | Highly Destabilizing | 0.993 | D | 0.574 | neutral | None | None | None | None | N |
V/I | 0.0811 | likely_benign | 0.0927 | benign | -0.17 | Destabilizing | 0.454 | N | 0.369 | neutral | N | 0.465204464 | None | None | N |
V/K | 0.7977 | likely_pathogenic | 0.7971 | pathogenic | -1.387 | Destabilizing | 0.728 | D | 0.571 | neutral | None | None | None | None | N |
V/L | 0.2014 | likely_benign | 0.2362 | benign | -0.17 | Destabilizing | 0.002 | N | 0.135 | neutral | N | 0.467935338 | None | None | N |
V/M | 0.1758 | likely_benign | 0.2051 | benign | -0.239 | Destabilizing | 0.949 | D | 0.593 | neutral | None | None | None | None | N |
V/N | 0.4412 | ambiguous | 0.5068 | ambiguous | -1.882 | Destabilizing | 0.974 | D | 0.623 | neutral | None | None | None | None | N |
V/P | 0.8869 | likely_pathogenic | 0.868 | pathogenic | -0.673 | Destabilizing | 0.991 | D | 0.602 | neutral | None | None | None | None | N |
V/Q | 0.6111 | likely_pathogenic | 0.634 | pathogenic | -1.614 | Destabilizing | 0.172 | N | 0.5 | neutral | None | None | None | None | N |
V/R | 0.7636 | likely_pathogenic | 0.7549 | pathogenic | -1.443 | Destabilizing | 0.949 | D | 0.633 | neutral | None | None | None | None | N |
V/S | 0.3473 | ambiguous | 0.3839 | ambiguous | -2.391 | Highly Destabilizing | 0.842 | D | 0.572 | neutral | None | None | None | None | N |
V/T | 0.2761 | likely_benign | 0.3109 | benign | -1.977 | Destabilizing | 0.915 | D | 0.491 | neutral | None | None | None | None | N |
V/W | 0.9241 | likely_pathogenic | 0.9339 | pathogenic | -1.666 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
V/Y | 0.761 | likely_pathogenic | 0.7846 | pathogenic | -1.191 | Destabilizing | 0.974 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.