Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21323 | 64192;64193;64194 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
N2AB | 19682 | 59269;59270;59271 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
N2A | 18755 | 56488;56489;56490 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
N2B | 12258 | 36997;36998;36999 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
Novex-1 | 12383 | 37372;37373;37374 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
Novex-2 | 12450 | 37573;37574;37575 | chr2:178587244;178587243;178587242 | chr2:179451971;179451970;179451969 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.987 | N | 0.631 | 0.324 | 0.365892764245 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.098 | likely_benign | 0.1052 | benign | -0.877 | Destabilizing | 0.977 | D | 0.439 | neutral | N | 0.492221744 | None | None | N |
T/C | 0.3356 | likely_benign | 0.3561 | ambiguous | -0.427 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/D | 0.5723 | likely_pathogenic | 0.5725 | pathogenic | -0.104 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/E | 0.4579 | ambiguous | 0.4904 | ambiguous | 0.024 | Stabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/F | 0.347 | ambiguous | 0.3886 | ambiguous | -0.918 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/G | 0.2376 | likely_benign | 0.2453 | benign | -1.215 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
T/H | 0.3517 | ambiguous | 0.3417 | ambiguous | -1.258 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/I | 0.2003 | likely_benign | 0.2443 | benign | -0.026 | Destabilizing | 0.987 | D | 0.631 | neutral | N | 0.486372394 | None | None | N |
T/K | 0.3479 | ambiguous | 0.316 | benign | -0.09 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.482675865 | None | None | N |
T/L | 0.0748 | likely_benign | 0.078 | benign | -0.026 | Destabilizing | 0.15 | N | 0.369 | neutral | None | None | None | None | N |
T/M | 0.0718 | likely_benign | 0.0776 | benign | -0.08 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
T/N | 0.0962 | likely_benign | 0.0969 | benign | -0.537 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
T/P | 0.1048 | likely_benign | 0.1004 | benign | -0.278 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | N | 0.47361051 | None | None | N |
T/Q | 0.2725 | likely_benign | 0.2635 | benign | -0.405 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
T/R | 0.3233 | likely_benign | 0.2867 | benign | -0.167 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | N | 0.472596552 | None | None | N |
T/S | 0.1267 | likely_benign | 0.1338 | benign | -0.892 | Destabilizing | 0.989 | D | 0.404 | neutral | N | 0.48487791 | None | None | N |
T/V | 0.1505 | likely_benign | 0.179 | benign | -0.278 | Destabilizing | 0.966 | D | 0.429 | neutral | None | None | None | None | N |
T/W | 0.7485 | likely_pathogenic | 0.7581 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/Y | 0.3454 | ambiguous | 0.3606 | ambiguous | -0.589 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.