Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21330 | 64213;64214;64215 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
N2AB | 19689 | 59290;59291;59292 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
N2A | 18762 | 56509;56510;56511 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
N2B | 12265 | 37018;37019;37020 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
Novex-1 | 12390 | 37393;37394;37395 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
Novex-2 | 12457 | 37594;37595;37596 | chr2:178587223;178587222;178587221 | chr2:179451950;179451949;179451948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs778195959 | -2.218 | 0.967 | D | 0.769 | 0.776 | 0.890950925297 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
L/F | rs778195959 | -2.218 | 0.967 | D | 0.769 | 0.776 | 0.890950925297 | gnomAD-4.0.0 | 6.15962E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09708E-06 | 0 | 0 |
L/P | rs2049213559 | None | 0.994 | D | 0.858 | 0.891 | 0.913711777733 | gnomAD-4.0.0 | 3.18458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86582E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9448 | likely_pathogenic | 0.9325 | pathogenic | -2.837 | Highly Destabilizing | 0.845 | D | 0.769 | deleterious | None | None | None | None | N |
L/C | 0.9226 | likely_pathogenic | 0.9233 | pathogenic | -2.62 | Highly Destabilizing | 0.154 | N | 0.739 | prob.delet. | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -3.544 | Highly Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | N |
L/E | 0.9974 | likely_pathogenic | 0.9965 | pathogenic | -3.36 | Highly Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
L/F | 0.8335 | likely_pathogenic | 0.7763 | pathogenic | -1.888 | Destabilizing | 0.967 | D | 0.769 | deleterious | D | 0.641991941 | None | None | N |
L/G | 0.9929 | likely_pathogenic | 0.9897 | pathogenic | -3.343 | Highly Destabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | N |
L/H | 0.9932 | likely_pathogenic | 0.99 | pathogenic | -2.714 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | D | 0.658818519 | None | None | N |
L/I | 0.2914 | likely_benign | 0.2852 | benign | -1.38 | Destabilizing | 0.805 | D | 0.733 | prob.delet. | D | 0.611962338 | None | None | N |
L/K | 0.996 | likely_pathogenic | 0.9937 | pathogenic | -2.33 | Highly Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
L/M | 0.3312 | likely_benign | 0.3071 | benign | -1.469 | Destabilizing | 0.496 | N | 0.541 | neutral | None | None | None | None | N |
L/N | 0.9955 | likely_pathogenic | 0.9937 | pathogenic | -2.702 | Highly Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
L/P | 0.9931 | likely_pathogenic | 0.99 | pathogenic | -1.848 | Destabilizing | 0.994 | D | 0.858 | deleterious | D | 0.658818519 | None | None | N |
L/Q | 0.989 | likely_pathogenic | 0.9832 | pathogenic | -2.651 | Highly Destabilizing | 0.987 | D | 0.82 | deleterious | None | None | None | None | N |
L/R | 0.9906 | likely_pathogenic | 0.985 | pathogenic | -1.869 | Destabilizing | 0.983 | D | 0.831 | deleterious | D | 0.642799158 | None | None | N |
L/S | 0.9934 | likely_pathogenic | 0.9908 | pathogenic | -3.36 | Highly Destabilizing | 0.975 | D | 0.812 | deleterious | None | None | None | None | N |
L/T | 0.9318 | likely_pathogenic | 0.9176 | pathogenic | -3.034 | Highly Destabilizing | 0.975 | D | 0.798 | deleterious | None | None | None | None | N |
L/V | 0.2989 | likely_benign | 0.3241 | benign | -1.848 | Destabilizing | 0.805 | D | 0.745 | deleterious | D | 0.581427327 | None | None | N |
L/W | 0.9876 | likely_pathogenic | 0.9809 | pathogenic | -2.256 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
L/Y | 0.988 | likely_pathogenic | 0.9815 | pathogenic | -2.031 | Highly Destabilizing | 0.996 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.