Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21340 | 64243;64244;64245 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
N2AB | 19699 | 59320;59321;59322 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
N2A | 18772 | 56539;56540;56541 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
N2B | 12275 | 37048;37049;37050 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
Novex-1 | 12400 | 37423;37424;37425 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
Novex-2 | 12467 | 37624;37625;37626 | chr2:178587193;178587192;178587191 | chr2:179451920;179451919;179451918 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2049206770 | None | 0.999 | D | 0.64 | 0.758 | 0.828767969993 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86048E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8679 | likely_pathogenic | 0.8708 | pathogenic | -2.412 | Highly Destabilizing | 0.999 | D | 0.64 | neutral | D | 0.550175263 | None | None | N |
V/C | 0.957 | likely_pathogenic | 0.9613 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.432 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/E | 0.9975 | likely_pathogenic | 0.997 | pathogenic | -3.132 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.630412324 | None | None | N |
V/F | 0.9224 | likely_pathogenic | 0.9186 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/G | 0.9467 | likely_pathogenic | 0.9438 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.630412324 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -2.847 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.1021 | likely_benign | 0.11 | benign | -0.73 | Destabilizing | 0.997 | D | 0.603 | neutral | N | 0.496488242 | None | None | N |
V/K | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/L | 0.7402 | likely_pathogenic | 0.751 | pathogenic | -0.73 | Destabilizing | 0.997 | D | 0.649 | neutral | N | 0.514025524 | None | None | N |
V/M | 0.7824 | likely_pathogenic | 0.7923 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/N | 0.9961 | likely_pathogenic | 0.9958 | pathogenic | -2.572 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
V/P | 0.9975 | likely_pathogenic | 0.9972 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.9966 | likely_pathogenic | 0.9958 | pathogenic | -2.243 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9949 | pathogenic | -1.976 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
V/S | 0.9773 | likely_pathogenic | 0.9774 | pathogenic | -3.07 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/T | 0.9335 | likely_pathogenic | 0.9365 | pathogenic | -2.625 | Highly Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
V/W | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/Y | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.