Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21343 | 64252;64253;64254 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
N2AB | 19702 | 59329;59330;59331 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
N2A | 18775 | 56548;56549;56550 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
N2B | 12278 | 37057;37058;37059 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
Novex-1 | 12403 | 37432;37433;37434 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
Novex-2 | 12470 | 37633;37634;37635 | chr2:178587184;178587183;178587182 | chr2:179451911;179451910;179451909 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.987 | D | 0.495 | 0.284 | 0.649263682055 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | None | None | 0.973 | N | 0.458 | 0.315 | 0.599559242703 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3787 | ambiguous | 0.3704 | ambiguous | -2.015 | Highly Destabilizing | 0.973 | D | 0.455 | neutral | N | 0.487140225 | None | None | N |
V/C | 0.731 | likely_pathogenic | 0.7247 | pathogenic | -2.0 | Highly Destabilizing | 0.269 | N | 0.344 | neutral | None | None | None | None | N |
V/D | 0.9162 | likely_pathogenic | 0.8791 | pathogenic | -3.273 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | D | 0.527022492 | None | None | N |
V/E | 0.5504 | ambiguous | 0.516 | ambiguous | -3.124 | Highly Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/F | 0.4154 | ambiguous | 0.3804 | ambiguous | -1.215 | Destabilizing | 0.999 | D | 0.763 | deleterious | N | 0.497775742 | None | None | N |
V/G | 0.6399 | likely_pathogenic | 0.5902 | pathogenic | -2.43 | Highly Destabilizing | 0.998 | D | 0.744 | deleterious | N | 0.508829332 | None | None | N |
V/H | 0.862 | likely_pathogenic | 0.8396 | pathogenic | -2.087 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/I | 0.0966 | likely_benign | 0.1021 | benign | -0.879 | Destabilizing | 0.987 | D | 0.495 | neutral | D | 0.525413135 | None | None | N |
V/K | 0.7353 | likely_pathogenic | 0.7057 | pathogenic | -1.709 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/L | 0.4957 | ambiguous | 0.4526 | ambiguous | -0.879 | Destabilizing | 0.973 | D | 0.458 | neutral | N | 0.4935061 | None | None | N |
V/M | 0.2427 | likely_benign | 0.2459 | benign | -1.167 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
V/N | 0.7492 | likely_pathogenic | 0.7039 | pathogenic | -2.043 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/P | 0.9942 | likely_pathogenic | 0.992 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/Q | 0.5368 | ambiguous | 0.5247 | ambiguous | -2.005 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
V/R | 0.6682 | likely_pathogenic | 0.6265 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.4954 | ambiguous | 0.4716 | ambiguous | -2.474 | Highly Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/T | 0.3713 | ambiguous | 0.3712 | ambiguous | -2.214 | Highly Destabilizing | 0.996 | D | 0.527 | neutral | None | None | None | None | N |
V/W | 0.9589 | likely_pathogenic | 0.9522 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
V/Y | 0.8296 | likely_pathogenic | 0.794 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.