Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21348 | 64267;64268;64269 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
N2AB | 19707 | 59344;59345;59346 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
N2A | 18780 | 56563;56564;56565 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
N2B | 12283 | 37072;37073;37074 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
Novex-1 | 12408 | 37447;37448;37449 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
Novex-2 | 12475 | 37648;37649;37650 | chr2:178587169;178587168;178587167 | chr2:179451896;179451895;179451894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1453250932 | None | 0.003 | N | 0.3 | 0.075 | 0.185906805712 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1453250932 | None | 0.003 | N | 0.3 | 0.075 | 0.185906805712 | gnomAD-4.0.0 | 1.23987E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69573E-06 | 0 | 0 |
P/T | None | None | 0.101 | N | 0.466 | 0.065 | 0.218112801441 | gnomAD-4.0.0 | 1.36879E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31906E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0697 | likely_benign | 0.0721 | benign | -1.166 | Destabilizing | 0.047 | N | 0.353 | neutral | N | 0.468474056 | None | None | N |
P/C | 0.3409 | ambiguous | 0.3454 | ambiguous | -0.824 | Destabilizing | 0.94 | D | 0.555 | neutral | None | None | None | None | N |
P/D | 0.6288 | likely_pathogenic | 0.6092 | pathogenic | -1.149 | Destabilizing | 0.418 | N | 0.455 | neutral | None | None | None | None | N |
P/E | 0.371 | ambiguous | 0.359 | ambiguous | -1.242 | Destabilizing | 0.418 | N | 0.425 | neutral | None | None | None | None | N |
P/F | 0.4024 | ambiguous | 0.4276 | ambiguous | -1.26 | Destabilizing | 0.836 | D | 0.561 | neutral | None | None | None | None | N |
P/G | 0.312 | likely_benign | 0.3043 | benign | -1.369 | Destabilizing | 0.129 | N | 0.513 | neutral | None | None | None | None | N |
P/H | 0.2482 | likely_benign | 0.255 | benign | -0.868 | Destabilizing | 0.794 | D | 0.548 | neutral | N | 0.467481217 | None | None | N |
P/I | 0.1879 | likely_benign | 0.2023 | benign | -0.751 | Destabilizing | 0.004 | N | 0.416 | neutral | None | None | None | None | N |
P/K | 0.3753 | ambiguous | 0.3721 | ambiguous | -0.906 | Destabilizing | 0.264 | N | 0.423 | neutral | None | None | None | None | N |
P/L | 0.1054 | likely_benign | 0.1246 | benign | -0.751 | Destabilizing | 0.047 | N | 0.457 | neutral | N | 0.460489291 | None | None | N |
P/M | 0.2061 | likely_benign | 0.2258 | benign | -0.474 | Destabilizing | 0.836 | D | 0.545 | neutral | None | None | None | None | N |
P/N | 0.3551 | ambiguous | 0.3505 | ambiguous | -0.624 | Destabilizing | 0.264 | N | 0.555 | neutral | None | None | None | None | N |
P/Q | 0.1889 | likely_benign | 0.1967 | benign | -0.946 | Destabilizing | 0.716 | D | 0.528 | neutral | None | None | None | None | N |
P/R | 0.2648 | likely_benign | 0.2656 | benign | -0.252 | Destabilizing | 0.655 | D | 0.551 | neutral | N | 0.466031184 | None | None | N |
P/S | 0.1369 | likely_benign | 0.1389 | benign | -1.024 | Destabilizing | 0.003 | N | 0.3 | neutral | N | 0.481845998 | None | None | N |
P/T | 0.098 | likely_benign | 0.1017 | benign | -1.021 | Destabilizing | 0.101 | N | 0.466 | neutral | N | 0.464164314 | None | None | N |
P/V | 0.1385 | likely_benign | 0.1432 | benign | -0.854 | Destabilizing | 0.001 | N | 0.367 | neutral | None | None | None | None | N |
P/W | 0.65 | likely_pathogenic | 0.6717 | pathogenic | -1.319 | Destabilizing | 0.983 | D | 0.565 | neutral | None | None | None | None | N |
P/Y | 0.425 | ambiguous | 0.437 | ambiguous | -1.043 | Destabilizing | 0.94 | D | 0.564 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.