Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21351 | 64276;64277;64278 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
N2AB | 19710 | 59353;59354;59355 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
N2A | 18783 | 56572;56573;56574 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
N2B | 12286 | 37081;37082;37083 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
Novex-1 | 12411 | 37456;37457;37458 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
Novex-2 | 12478 | 37657;37658;37659 | chr2:178587160;178587159;178587158 | chr2:179451887;179451886;179451885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1421350004 | -1.0 | 1.0 | N | 0.757 | 0.381 | 0.346992582518 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
P/S | rs1421350004 | -1.0 | 1.0 | N | 0.757 | 0.381 | 0.346992582518 | gnomAD-4.0.0 | 1.27384E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.71646E-05 | 0 | 6.0529E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0996 | likely_benign | 0.0928 | benign | -1.143 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.484647193 | None | None | N |
P/C | 0.5964 | likely_pathogenic | 0.5647 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/D | 0.9119 | likely_pathogenic | 0.8977 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
P/E | 0.7715 | likely_pathogenic | 0.7472 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/F | 0.6925 | likely_pathogenic | 0.6785 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/G | 0.4452 | ambiguous | 0.4353 | ambiguous | -1.329 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
P/H | 0.5121 | ambiguous | 0.4957 | ambiguous | -0.77 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/I | 0.6333 | likely_pathogenic | 0.6246 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
P/K | 0.8129 | likely_pathogenic | 0.7789 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/L | 0.3646 | ambiguous | 0.3641 | ambiguous | -0.776 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.516994589 | None | None | N |
P/M | 0.5614 | ambiguous | 0.5511 | ambiguous | -0.504 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/N | 0.7465 | likely_pathogenic | 0.731 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
P/Q | 0.4475 | ambiguous | 0.4154 | ambiguous | -0.859 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.525352381 | None | None | N |
P/R | 0.6655 | likely_pathogenic | 0.624 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.776 | deleterious | D | 0.536366292 | None | None | N |
P/S | 0.2316 | likely_benign | 0.2157 | benign | -0.946 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.482609731 | None | None | N |
P/T | 0.2643 | likely_benign | 0.2531 | benign | -0.951 | Destabilizing | 1.0 | D | 0.746 | deleterious | N | 0.513742586 | None | None | N |
P/V | 0.439 | ambiguous | 0.4247 | ambiguous | -0.864 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/W | 0.8783 | likely_pathogenic | 0.8727 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/Y | 0.7318 | likely_pathogenic | 0.7182 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.