Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21353 | 64282;64283;64284 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
N2AB | 19712 | 59359;59360;59361 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
N2A | 18785 | 56578;56579;56580 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
N2B | 12288 | 37087;37088;37089 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
Novex-1 | 12413 | 37462;37463;37464 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
Novex-2 | 12480 | 37663;37664;37665 | chr2:178587154;178587153;178587152 | chr2:179451881;179451880;179451879 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.392 | N | 0.813 | 0.2 | 0.202086224978 | gnomAD-4.0.0 | 6.84395E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99709E-07 | 0 | 0 |
D/V | None | None | 0.693 | N | 0.789 | 0.23 | 0.523133305157 | gnomAD-4.0.0 | 3.42198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59884E-06 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.138 | likely_benign | 0.1416 | benign | -0.106 | Destabilizing | 0.244 | N | 0.82 | deleterious | N | 0.47026078 | None | None | N |
D/C | 0.4759 | ambiguous | 0.4985 | ambiguous | -0.094 | Destabilizing | 0.986 | D | 0.833 | deleterious | None | None | None | None | N |
D/E | 0.1018 | likely_benign | 0.1249 | benign | -0.562 | Destabilizing | 0.002 | N | 0.32 | neutral | N | 0.378812057 | None | None | N |
D/F | 0.4606 | ambiguous | 0.5011 | ambiguous | 0.614 | Stabilizing | 0.986 | D | 0.877 | deleterious | None | None | None | None | N |
D/G | 0.2276 | likely_benign | 0.2494 | benign | -0.53 | Destabilizing | 0.392 | N | 0.813 | deleterious | N | 0.509800603 | None | None | N |
D/H | 0.2928 | likely_benign | 0.3048 | benign | 0.268 | Stabilizing | 0.945 | D | 0.844 | deleterious | N | 0.509973962 | None | None | N |
D/I | 0.2212 | likely_benign | 0.23 | benign | 1.032 | Stabilizing | 0.858 | D | 0.853 | deleterious | None | None | None | None | N |
D/K | 0.441 | ambiguous | 0.4678 | ambiguous | -0.399 | Destabilizing | 0.6 | D | 0.827 | deleterious | None | None | None | None | N |
D/L | 0.2786 | likely_benign | 0.2892 | benign | 1.032 | Stabilizing | 0.749 | D | 0.781 | deleterious | None | None | None | None | N |
D/M | 0.4125 | ambiguous | 0.4485 | ambiguous | 1.356 | Stabilizing | 0.986 | D | 0.869 | deleterious | None | None | None | None | N |
D/N | 0.1128 | likely_benign | 0.1127 | benign | -0.938 | Destabilizing | 0.693 | D | 0.855 | deleterious | N | 0.497602097 | None | None | N |
D/P | 0.619 | likely_pathogenic | 0.6231 | pathogenic | 0.68 | Stabilizing | 0.858 | D | 0.821 | deleterious | None | None | None | None | N |
D/Q | 0.3092 | likely_benign | 0.3453 | ambiguous | -0.691 | Destabilizing | 0.6 | D | 0.831 | deleterious | None | None | None | None | N |
D/R | 0.4902 | ambiguous | 0.508 | ambiguous | -0.191 | Destabilizing | 0.6 | D | 0.792 | deleterious | None | None | None | None | N |
D/S | 0.1198 | likely_benign | 0.1228 | benign | -1.255 | Destabilizing | 0.299 | N | 0.804 | deleterious | None | None | None | None | N |
D/T | 0.1739 | likely_benign | 0.1788 | benign | -0.896 | Destabilizing | 0.749 | D | 0.747 | deleterious | None | None | None | None | N |
D/V | 0.1339 | likely_benign | 0.1382 | benign | 0.68 | Stabilizing | 0.693 | D | 0.789 | deleterious | N | 0.47362916 | None | None | N |
D/W | 0.8332 | likely_pathogenic | 0.8578 | pathogenic | 0.726 | Stabilizing | 0.986 | D | 0.817 | deleterious | None | None | None | None | N |
D/Y | 0.2173 | likely_benign | 0.2305 | benign | 0.849 | Stabilizing | 0.981 | D | 0.878 | deleterious | N | 0.516881291 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.