Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21356 | 64291;64292;64293 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
N2AB | 19715 | 59368;59369;59370 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
N2A | 18788 | 56587;56588;56589 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
N2B | 12291 | 37096;37097;37098 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
Novex-1 | 12416 | 37471;37472;37473 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
Novex-2 | 12483 | 37672;37673;37674 | chr2:178587145;178587144;178587143 | chr2:179451872;179451871;179451870 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.883 | N | 0.621 | 0.116 | 0.199424873507 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 7.32654E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2265 | likely_benign | 0.2203 | benign | -0.074 | Destabilizing | 0.74 | D | 0.505 | neutral | None | None | None | None | N |
K/C | 0.514 | ambiguous | 0.5238 | ambiguous | -0.515 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.412 | ambiguous | 0.3974 | ambiguous | -0.406 | Destabilizing | 0.909 | D | 0.613 | neutral | None | None | None | None | N |
K/E | 0.1456 | likely_benign | 0.151 | benign | -0.376 | Destabilizing | 0.682 | D | 0.497 | neutral | N | 0.419133819 | None | None | N |
K/F | 0.5927 | likely_pathogenic | 0.5861 | pathogenic | -0.313 | Destabilizing | 0.996 | D | 0.697 | prob.delet. | None | None | None | None | N |
K/G | 0.3018 | likely_benign | 0.2916 | benign | -0.244 | Destabilizing | 0.909 | D | 0.385 | neutral | None | None | None | None | N |
K/H | 0.2427 | likely_benign | 0.2442 | benign | -0.316 | Destabilizing | 0.987 | D | 0.583 | neutral | None | None | None | None | N |
K/I | 0.2639 | likely_benign | 0.2626 | benign | 0.306 | Stabilizing | 0.938 | D | 0.727 | deleterious | N | 0.521415611 | None | None | N |
K/L | 0.2502 | likely_benign | 0.2394 | benign | 0.306 | Stabilizing | 0.909 | D | 0.385 | neutral | None | None | None | None | N |
K/M | 0.198 | likely_benign | 0.1929 | benign | -0.289 | Destabilizing | 0.996 | D | 0.581 | neutral | None | None | None | None | N |
K/N | 0.3016 | likely_benign | 0.2948 | benign | -0.133 | Destabilizing | 0.883 | D | 0.621 | neutral | N | 0.449688799 | None | None | N |
K/P | 0.6184 | likely_pathogenic | 0.571 | pathogenic | 0.203 | Stabilizing | 0.984 | D | 0.605 | neutral | None | None | None | None | N |
K/Q | 0.1119 | likely_benign | 0.1113 | benign | -0.191 | Destabilizing | 0.883 | D | 0.633 | neutral | N | 0.469831998 | None | None | N |
K/R | 0.0873 | likely_benign | 0.0853 | benign | -0.069 | Destabilizing | 0.007 | N | 0.312 | neutral | N | 0.483107939 | None | None | N |
K/S | 0.273 | likely_benign | 0.2692 | benign | -0.428 | Destabilizing | 0.74 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.1367 | likely_benign | 0.1338 | benign | -0.265 | Destabilizing | 0.883 | D | 0.558 | neutral | N | 0.50915839 | None | None | N |
K/V | 0.209 | likely_benign | 0.2091 | benign | 0.203 | Stabilizing | 0.953 | D | 0.621 | neutral | None | None | None | None | N |
K/W | 0.6849 | likely_pathogenic | 0.6809 | pathogenic | -0.449 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
K/Y | 0.494 | ambiguous | 0.4882 | ambiguous | -0.103 | Destabilizing | 0.984 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.