Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21359 | 64300;64301;64302 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
N2AB | 19718 | 59377;59378;59379 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
N2A | 18791 | 56596;56597;56598 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
N2B | 12294 | 37105;37106;37107 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
Novex-1 | 12419 | 37480;37481;37482 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
Novex-2 | 12486 | 37681;37682;37683 | chr2:178587136;178587135;178587134 | chr2:179451863;179451862;179451861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.802 | N | 0.724 | 0.083 | 0.293147016451 | gnomAD-4.0.0 | 1.59242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86107E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2267 | likely_benign | 0.1734 | benign | -1.039 | Destabilizing | 0.963 | D | 0.77 | deleterious | None | None | None | None | N |
L/C | 0.5387 | ambiguous | 0.4436 | ambiguous | -0.789 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/D | 0.8256 | likely_pathogenic | 0.7488 | pathogenic | 0.022 | Stabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
L/E | 0.4719 | ambiguous | 0.3712 | ambiguous | -0.023 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
L/F | 0.1801 | likely_benign | 0.1447 | benign | -0.777 | Destabilizing | 0.986 | D | 0.742 | deleterious | N | 0.487654463 | None | None | N |
L/G | 0.6087 | likely_pathogenic | 0.5064 | ambiguous | -1.276 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
L/H | 0.2572 | likely_benign | 0.1909 | benign | -0.427 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.471934535 | None | None | N |
L/I | 0.1063 | likely_benign | 0.0964 | benign | -0.508 | Destabilizing | 0.125 | N | 0.429 | neutral | N | 0.433435976 | None | None | N |
L/K | 0.2068 | likely_benign | 0.1557 | benign | -0.5 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
L/M | 0.1167 | likely_benign | 0.114 | benign | -0.46 | Destabilizing | 0.995 | D | 0.703 | prob.delet. | None | None | None | None | N |
L/N | 0.4582 | ambiguous | 0.3772 | ambiguous | -0.317 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
L/P | 0.297 | likely_benign | 0.2224 | benign | -0.651 | Destabilizing | 0.998 | D | 0.819 | deleterious | N | 0.478428995 | None | None | N |
L/Q | 0.1446 | likely_benign | 0.1091 | benign | -0.498 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
L/R | 0.1715 | likely_benign | 0.1183 | benign | 0.035 | Stabilizing | 0.998 | D | 0.826 | deleterious | N | 0.463046807 | None | None | N |
L/S | 0.34 | ambiguous | 0.2703 | benign | -0.953 | Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | N |
L/T | 0.1857 | likely_benign | 0.1479 | benign | -0.879 | Destabilizing | 0.989 | D | 0.705 | prob.delet. | None | None | None | None | N |
L/V | 0.0953 | likely_benign | 0.0847 | benign | -0.651 | Destabilizing | 0.802 | D | 0.724 | deleterious | N | 0.454368608 | None | None | N |
L/W | 0.3511 | ambiguous | 0.2683 | benign | -0.763 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
L/Y | 0.4142 | ambiguous | 0.3373 | benign | -0.531 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.