Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21366 | 64321;64322;64323 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
N2AB | 19725 | 59398;59399;59400 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
N2A | 18798 | 56617;56618;56619 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
N2B | 12301 | 37126;37127;37128 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
Novex-1 | 12426 | 37501;37502;37503 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
Novex-2 | 12493 | 37702;37703;37704 | chr2:178586805;178586804;178586803 | chr2:179451532;179451531;179451530 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2049080412 | None | 0.546 | N | 0.535 | 0.291 | 0.277730125212 | gnomAD-4.0.0 | 3.21062E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73947E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1557 | likely_benign | 0.1372 | benign | -0.722 | Destabilizing | 0.004 | N | 0.304 | neutral | N | 0.456944766 | None | None | I |
E/C | 0.8446 | likely_pathogenic | 0.8355 | pathogenic | -0.057 | Destabilizing | 0.992 | D | 0.865 | deleterious | None | None | None | None | I |
E/D | 0.5233 | ambiguous | 0.4455 | ambiguous | -0.482 | Destabilizing | 0.709 | D | 0.478 | neutral | N | 0.517206578 | None | None | I |
E/F | 0.8617 | likely_pathogenic | 0.8267 | pathogenic | -0.645 | Destabilizing | 0.848 | D | 0.855 | deleterious | None | None | None | None | I |
E/G | 0.4416 | ambiguous | 0.3816 | ambiguous | -0.933 | Destabilizing | 0.376 | N | 0.607 | neutral | N | 0.464564247 | None | None | I |
E/H | 0.7663 | likely_pathogenic | 0.7082 | pathogenic | -0.632 | Destabilizing | 0.992 | D | 0.548 | neutral | None | None | None | None | I |
E/I | 0.3459 | ambiguous | 0.3021 | benign | -0.188 | Destabilizing | 0.491 | N | 0.6 | neutral | None | None | None | None | I |
E/K | 0.2604 | likely_benign | 0.2193 | benign | 0.185 | Stabilizing | 0.546 | D | 0.535 | neutral | N | 0.410212399 | None | None | I |
E/L | 0.4782 | ambiguous | 0.4246 | ambiguous | -0.188 | Destabilizing | 0.444 | N | 0.619 | neutral | None | None | None | None | I |
E/M | 0.4906 | ambiguous | 0.4486 | ambiguous | 0.159 | Stabilizing | 0.955 | D | 0.809 | deleterious | None | None | None | None | I |
E/N | 0.6716 | likely_pathogenic | 0.603 | pathogenic | -0.142 | Destabilizing | 0.919 | D | 0.555 | neutral | None | None | None | None | I |
E/P | 0.3489 | ambiguous | 0.3068 | benign | -0.346 | Destabilizing | 0.919 | D | 0.606 | neutral | None | None | None | None | I |
E/Q | 0.1828 | likely_benign | 0.1595 | benign | -0.129 | Destabilizing | 0.895 | D | 0.524 | neutral | N | 0.498351459 | None | None | I |
E/R | 0.4255 | ambiguous | 0.3645 | ambiguous | 0.292 | Stabilizing | 0.919 | D | 0.548 | neutral | None | None | None | None | I |
E/S | 0.3963 | ambiguous | 0.3419 | ambiguous | -0.325 | Destabilizing | 0.444 | N | 0.482 | neutral | None | None | None | None | I |
E/T | 0.3605 | ambiguous | 0.3133 | benign | -0.148 | Destabilizing | 0.615 | D | 0.648 | neutral | None | None | None | None | I |
E/V | 0.1865 | likely_benign | 0.1702 | benign | -0.346 | Destabilizing | 0.004 | N | 0.391 | neutral | N | 0.379425345 | None | None | I |
E/W | 0.9771 | likely_pathogenic | 0.9678 | pathogenic | -0.451 | Destabilizing | 0.992 | D | 0.879 | deleterious | None | None | None | None | I |
E/Y | 0.8254 | likely_pathogenic | 0.7737 | pathogenic | -0.392 | Destabilizing | 0.919 | D | 0.855 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.