Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21370 | 64333;64334;64335 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
N2AB | 19729 | 59410;59411;59412 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
N2A | 18802 | 56629;56630;56631 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
N2B | 12305 | 37138;37139;37140 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
Novex-1 | 12430 | 37513;37514;37515 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
Novex-2 | 12497 | 37714;37715;37716 | chr2:178586793;178586792;178586791 | chr2:179451520;179451519;179451518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2049075418 | None | 1.0 | D | 0.923 | 0.551 | 0.861509126281 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs2049075418 | None | 1.0 | D | 0.923 | 0.551 | 0.861509126281 | gnomAD-4.0.0 | 1.86122E-06 | None | None | None | None | N | None | 1.33786E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9405 | likely_pathogenic | 0.8986 | pathogenic | -2.486 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.52538183 | None | None | N |
P/C | 0.9841 | likely_pathogenic | 0.9822 | pathogenic | -2.198 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
P/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/E | 0.9995 | likely_pathogenic | 0.999 | pathogenic | -3.08 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/F | 0.9998 | likely_pathogenic | 0.9995 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
P/G | 0.9982 | likely_pathogenic | 0.9972 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/H | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
P/I | 0.9405 | likely_pathogenic | 0.8958 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.944 | deleterious | None | None | None | None | N |
P/K | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -1.926 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/L | 0.9654 | likely_pathogenic | 0.9324 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.551119407 | None | None | N |
P/M | 0.9959 | likely_pathogenic | 0.9921 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/N | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -2.454 | Highly Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
P/Q | 0.9991 | likely_pathogenic | 0.9983 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.541372944 | None | None | N |
P/R | 0.9989 | likely_pathogenic | 0.9982 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.946 | deleterious | D | 0.56374316 | None | None | N |
P/S | 0.996 | likely_pathogenic | 0.9931 | pathogenic | -2.94 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.545892395 | None | None | N |
P/T | 0.9865 | likely_pathogenic | 0.9765 | pathogenic | -2.559 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.529002681 | None | None | N |
P/V | 0.809 | likely_pathogenic | 0.7307 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
P/W | 1.0 | likely_pathogenic | 0.9999 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/Y | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.