Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21372 | 64339;64340;64341 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
N2AB | 19731 | 59416;59417;59418 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
N2A | 18804 | 56635;56636;56637 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
N2B | 12307 | 37144;37145;37146 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
Novex-1 | 12432 | 37519;37520;37521 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
Novex-2 | 12499 | 37720;37721;37722 | chr2:178586787;178586786;178586785 | chr2:179451514;179451513;179451512 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 1.0 | N | 0.73 | 0.43 | 0.601896402847 | gnomAD-4.0.0 | 6.84762E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99912E-07 | 0 | 0 |
K/R | rs1186477441 | -0.089 | 0.999 | N | 0.596 | 0.146 | 0.287603790349 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
K/R | rs1186477441 | -0.089 | 0.999 | N | 0.596 | 0.146 | 0.287603790349 | gnomAD-4.0.0 | 1.36952E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.814 | likely_pathogenic | 0.6472 | pathogenic | 0.002 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
K/C | 0.898 | likely_pathogenic | 0.8032 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
K/D | 0.8639 | likely_pathogenic | 0.7366 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
K/E | 0.7103 | likely_pathogenic | 0.4887 | ambiguous | 0.112 | Stabilizing | 0.999 | D | 0.619 | neutral | N | 0.507955164 | None | None | I |
K/F | 0.9406 | likely_pathogenic | 0.8799 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
K/G | 0.8102 | likely_pathogenic | 0.6582 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/H | 0.4955 | ambiguous | 0.393 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/I | 0.8059 | likely_pathogenic | 0.6626 | pathogenic | 0.562 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.473495152 | None | None | I |
K/L | 0.7481 | likely_pathogenic | 0.5985 | pathogenic | 0.562 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/M | 0.6144 | likely_pathogenic | 0.4488 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/N | 0.7483 | likely_pathogenic | 0.5985 | pathogenic | 0.149 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.436492136 | None | None | I |
K/P | 0.9612 | likely_pathogenic | 0.9302 | pathogenic | 0.404 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/Q | 0.361 | ambiguous | 0.2301 | benign | 0.032 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.492062992 | None | None | I |
K/R | 0.1295 | likely_benign | 0.1115 | benign | -0.104 | Destabilizing | 0.999 | D | 0.596 | neutral | N | 0.489273403 | None | None | I |
K/S | 0.828 | likely_pathogenic | 0.6657 | pathogenic | -0.331 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/T | 0.6724 | likely_pathogenic | 0.4964 | ambiguous | -0.138 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.494911296 | None | None | I |
K/V | 0.765 | likely_pathogenic | 0.6079 | pathogenic | 0.404 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/W | 0.9325 | likely_pathogenic | 0.8784 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
K/Y | 0.8278 | likely_pathogenic | 0.7215 | pathogenic | 0.261 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.