Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21380 | 64363;64364;64365 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
N2AB | 19739 | 59440;59441;59442 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
N2A | 18812 | 56659;56660;56661 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
N2B | 12315 | 37168;37169;37170 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
Novex-1 | 12440 | 37543;37544;37545 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
Novex-2 | 12507 | 37744;37745;37746 | chr2:178586763;178586762;178586761 | chr2:179451490;179451489;179451488 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.578 | 0.27 | 0.336647302497 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | rs2049068326 | None | 0.999 | N | 0.531 | 0.221 | None | gnomAD-4.0.0 | 2.05359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69947E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5091 | ambiguous | 0.3948 | ambiguous | -0.157 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
K/C | 0.839 | likely_pathogenic | 0.7874 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/D | 0.883 | likely_pathogenic | 0.8024 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/E | 0.4803 | ambiguous | 0.3476 | ambiguous | -0.134 | Destabilizing | 0.999 | D | 0.578 | neutral | N | 0.491214843 | None | None | N |
K/F | 0.97 | likely_pathogenic | 0.947 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/G | 0.5996 | likely_pathogenic | 0.4793 | ambiguous | -0.391 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/H | 0.6565 | likely_pathogenic | 0.5784 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/I | 0.7905 | likely_pathogenic | 0.6998 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
K/L | 0.7531 | likely_pathogenic | 0.644 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/M | 0.6082 | likely_pathogenic | 0.4836 | ambiguous | 0.484 | Stabilizing | 1.0 | D | 0.658 | neutral | N | 0.502083566 | None | None | N |
K/N | 0.7873 | likely_pathogenic | 0.6546 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.762 | deleterious | N | 0.508397881 | None | None | N |
K/P | 0.8255 | likely_pathogenic | 0.7871 | pathogenic | 0.237 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Q | 0.2734 | likely_benign | 0.2157 | benign | -0.144 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.520673745 | None | None | N |
K/R | 0.0838 | likely_benign | 0.0814 | benign | -0.125 | Destabilizing | 0.999 | D | 0.531 | neutral | N | 0.47488274 | None | None | N |
K/S | 0.6585 | likely_pathogenic | 0.522 | ambiguous | -0.394 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/T | 0.5534 | ambiguous | 0.4137 | ambiguous | -0.231 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.503664065 | None | None | N |
K/V | 0.6725 | likely_pathogenic | 0.5692 | pathogenic | 0.237 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/W | 0.9429 | likely_pathogenic | 0.9131 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
K/Y | 0.9102 | likely_pathogenic | 0.8586 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.