Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21381 | 64366;64367;64368 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
N2AB | 19740 | 59443;59444;59445 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
N2A | 18813 | 56662;56663;56664 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
N2B | 12316 | 37171;37172;37173 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
Novex-1 | 12441 | 37546;37547;37548 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
Novex-2 | 12508 | 37747;37748;37749 | chr2:178586760;178586759;178586758 | chr2:179451487;179451486;179451485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2154181598 | None | 0.058 | N | 0.186 | 0.108 | 0.12205267543 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94326E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs2154181598 | None | 0.058 | N | 0.186 | 0.108 | 0.12205267543 | gnomAD-4.0.0 | 6.57203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9478E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4339 | ambiguous | 0.3781 | ambiguous | -0.645 | Destabilizing | 0.754 | D | 0.425 | neutral | None | None | None | None | N |
N/C | 0.4908 | ambiguous | 0.4439 | ambiguous | 0.23 | Stabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
N/D | 0.2032 | likely_benign | 0.1647 | benign | -0.475 | Destabilizing | 0.822 | D | 0.461 | neutral | N | 0.469399563 | None | None | N |
N/E | 0.5608 | ambiguous | 0.4435 | ambiguous | -0.494 | Destabilizing | 0.86 | D | 0.403 | neutral | None | None | None | None | N |
N/F | 0.6188 | likely_pathogenic | 0.5779 | pathogenic | -0.97 | Destabilizing | 0.978 | D | 0.603 | neutral | None | None | None | None | N |
N/G | 0.431 | ambiguous | 0.4074 | ambiguous | -0.839 | Destabilizing | 0.754 | D | 0.376 | neutral | None | None | None | None | N |
N/H | 0.1618 | likely_benign | 0.1487 | benign | -0.914 | Destabilizing | 0.032 | N | 0.307 | neutral | N | 0.515211997 | None | None | N |
N/I | 0.4958 | ambiguous | 0.4018 | ambiguous | -0.208 | Destabilizing | 0.942 | D | 0.597 | neutral | N | 0.497528117 | None | None | N |
N/K | 0.5559 | ambiguous | 0.4297 | ambiguous | -0.01 | Destabilizing | 0.822 | D | 0.447 | neutral | N | 0.519001664 | None | None | N |
N/L | 0.4358 | ambiguous | 0.3735 | ambiguous | -0.208 | Destabilizing | 0.86 | D | 0.535 | neutral | None | None | None | None | N |
N/M | 0.4422 | ambiguous | 0.3881 | ambiguous | 0.491 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
N/P | 0.9806 | likely_pathogenic | 0.973 | pathogenic | -0.328 | Destabilizing | 0.978 | D | 0.556 | neutral | None | None | None | None | N |
N/Q | 0.4887 | ambiguous | 0.4057 | ambiguous | -0.697 | Destabilizing | 0.956 | D | 0.475 | neutral | None | None | None | None | N |
N/R | 0.6169 | likely_pathogenic | 0.5106 | ambiguous | 0.132 | Stabilizing | 0.956 | D | 0.459 | neutral | None | None | None | None | N |
N/S | 0.123 | likely_benign | 0.1185 | benign | -0.361 | Destabilizing | 0.058 | N | 0.186 | neutral | N | 0.461086724 | None | None | N |
N/T | 0.1363 | likely_benign | 0.1246 | benign | -0.235 | Destabilizing | 0.058 | N | 0.205 | neutral | N | 0.453117814 | None | None | N |
N/V | 0.4652 | ambiguous | 0.3802 | ambiguous | -0.328 | Destabilizing | 0.956 | D | 0.533 | neutral | None | None | None | None | N |
N/W | 0.8493 | likely_pathogenic | 0.8238 | pathogenic | -0.835 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
N/Y | 0.2059 | likely_benign | 0.1797 | benign | -0.59 | Destabilizing | 0.942 | D | 0.567 | neutral | N | 0.504276066 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.