Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21386 | 64381;64382;64383 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
N2AB | 19745 | 59458;59459;59460 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
N2A | 18818 | 56677;56678;56679 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
N2B | 12321 | 37186;37187;37188 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
Novex-1 | 12446 | 37561;37562;37563 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
Novex-2 | 12513 | 37762;37763;37764 | chr2:178586745;178586744;178586743 | chr2:179451472;179451471;179451470 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.103 | N | 0.436 | 0.136 | 0.361160317528 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15966E-05 | 1.65755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3991 | ambiguous | 0.3493 | ambiguous | -0.9 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
A/D | 0.6368 | likely_pathogenic | 0.5124 | ambiguous | -1.758 | Destabilizing | 0.984 | D | 0.699 | prob.neutral | N | 0.505859008 | None | None | N |
A/E | 0.4725 | ambiguous | 0.3464 | ambiguous | -1.614 | Destabilizing | 0.988 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/F | 0.3779 | ambiguous | 0.3203 | benign | -0.631 | Destabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/G | 0.1352 | likely_benign | 0.1468 | benign | -1.225 | Destabilizing | 0.004 | N | 0.234 | neutral | N | 0.426936865 | None | None | N |
A/H | 0.4985 | ambiguous | 0.4065 | ambiguous | -1.761 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/I | 0.2851 | likely_benign | 0.2197 | benign | 0.329 | Stabilizing | 0.851 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/K | 0.5732 | likely_pathogenic | 0.4324 | ambiguous | -1.063 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/L | 0.1952 | likely_benign | 0.1515 | benign | 0.329 | Stabilizing | 0.851 | D | 0.639 | neutral | None | None | None | None | N |
A/M | 0.2485 | likely_benign | 0.2028 | benign | 0.114 | Stabilizing | 0.997 | D | 0.685 | prob.neutral | None | None | None | None | N |
A/N | 0.3611 | ambiguous | 0.292 | benign | -1.2 | Destabilizing | 0.976 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/P | 0.9585 | likely_pathogenic | 0.947 | pathogenic | 0.002 | Stabilizing | 0.995 | D | 0.697 | prob.neutral | N | 0.489246003 | None | None | N |
A/Q | 0.353 | ambiguous | 0.2932 | benign | -1.071 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/R | 0.4751 | ambiguous | 0.3666 | ambiguous | -1.118 | Destabilizing | 0.988 | D | 0.71 | prob.delet. | None | None | None | None | N |
A/S | 0.0982 | likely_benign | 0.0916 | benign | -1.606 | Destabilizing | 0.896 | D | 0.547 | neutral | N | 0.398224537 | None | None | N |
A/T | 0.1012 | likely_benign | 0.0831 | benign | -1.337 | Destabilizing | 0.896 | D | 0.627 | neutral | N | 0.415967723 | None | None | N |
A/V | 0.1643 | likely_benign | 0.1281 | benign | 0.002 | Stabilizing | 0.103 | N | 0.436 | neutral | N | 0.476749609 | None | None | N |
A/W | 0.7903 | likely_pathogenic | 0.7219 | pathogenic | -1.37 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
A/Y | 0.5017 | ambiguous | 0.4158 | ambiguous | -0.762 | Destabilizing | 0.996 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.