Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21389 | 64390;64391;64392 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
N2AB | 19748 | 59467;59468;59469 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
N2A | 18821 | 56686;56687;56688 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
N2B | 12324 | 37195;37196;37197 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
Novex-1 | 12449 | 37570;37571;37572 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
Novex-2 | 12516 | 37771;37772;37773 | chr2:178586736;178586735;178586734 | chr2:179451463;179451462;179451461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs2049063426 | None | 0.989 | D | 0.617 | 0.341 | 0.537402380065 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs2049063426 | None | 0.989 | D | 0.617 | 0.341 | 0.537402380065 | gnomAD-4.0.0 | 6.57756E-06 | None | None | None | None | I | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1473 | likely_benign | 0.1303 | benign | -1.881 | Destabilizing | 0.978 | D | 0.51 | neutral | N | 0.470826502 | None | None | I |
P/C | 0.8072 | likely_pathogenic | 0.7716 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/D | 0.9476 | likely_pathogenic | 0.9016 | pathogenic | -2.299 | Highly Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | I |
P/E | 0.7006 | likely_pathogenic | 0.5651 | pathogenic | -2.14 | Highly Destabilizing | 0.983 | D | 0.547 | neutral | None | None | None | None | I |
P/F | 0.8554 | likely_pathogenic | 0.8298 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
P/G | 0.746 | likely_pathogenic | 0.679 | pathogenic | -2.329 | Highly Destabilizing | 0.992 | D | 0.637 | neutral | None | None | None | None | I |
P/H | 0.5383 | ambiguous | 0.4489 | ambiguous | -1.835 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.477340856 | None | None | I |
P/I | 0.5829 | likely_pathogenic | 0.551 | ambiguous | -0.666 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | I |
P/K | 0.4316 | ambiguous | 0.3498 | ambiguous | -1.619 | Destabilizing | 0.246 | N | 0.305 | neutral | None | None | None | None | I |
P/L | 0.2572 | likely_benign | 0.2312 | benign | -0.666 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.482594321 | None | None | I |
P/M | 0.5535 | ambiguous | 0.5124 | ambiguous | -0.522 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/N | 0.8383 | likely_pathogenic | 0.7811 | pathogenic | -1.799 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
P/Q | 0.3425 | ambiguous | 0.2716 | benign | -1.767 | Destabilizing | 0.995 | D | 0.69 | prob.neutral | None | None | None | None | I |
P/R | 0.384 | ambiguous | 0.3073 | benign | -1.264 | Destabilizing | 0.987 | D | 0.663 | neutral | N | 0.495706303 | None | None | I |
P/S | 0.4283 | ambiguous | 0.3533 | ambiguous | -2.345 | Highly Destabilizing | 0.978 | D | 0.592 | neutral | N | 0.507654093 | None | None | I |
P/T | 0.3472 | ambiguous | 0.2922 | benign | -2.052 | Highly Destabilizing | 0.989 | D | 0.617 | neutral | D | 0.522911547 | None | None | I |
P/V | 0.3882 | ambiguous | 0.3719 | ambiguous | -1.043 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | I |
P/W | 0.9404 | likely_pathogenic | 0.9143 | pathogenic | -1.658 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/Y | 0.8204 | likely_pathogenic | 0.7652 | pathogenic | -1.274 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.