Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21398 | 64417;64418;64419 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
N2AB | 19757 | 59494;59495;59496 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
N2A | 18830 | 56713;56714;56715 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
N2B | 12333 | 37222;37223;37224 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
Novex-1 | 12458 | 37597;37598;37599 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
Novex-2 | 12525 | 37798;37799;37800 | chr2:178586709;178586708;178586707 | chr2:179451436;179451435;179451434 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs727504754 | -2.171 | 0.942 | D | 0.765 | 0.52 | 0.8006517185 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.61455E-04 | None | 0 | 0 | 0 |
I/S | rs727504754 | -2.171 | 0.942 | D | 0.765 | 0.52 | 0.8006517185 | gnomAD-4.0.0 | 1.75201E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.57652E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9546 | likely_pathogenic | 0.9435 | pathogenic | -2.196 | Highly Destabilizing | 0.754 | D | 0.637 | neutral | None | None | None | None | I |
I/C | 0.9895 | likely_pathogenic | 0.9862 | pathogenic | -1.312 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | None | None | None | None | I |
I/D | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -1.971 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | I |
I/E | 0.9917 | likely_pathogenic | 0.9891 | pathogenic | -1.911 | Destabilizing | 0.978 | D | 0.801 | deleterious | None | None | None | None | I |
I/F | 0.9566 | likely_pathogenic | 0.9443 | pathogenic | -1.533 | Destabilizing | 0.942 | D | 0.734 | prob.delet. | N | 0.510382587 | None | None | I |
I/G | 0.9958 | likely_pathogenic | 0.9942 | pathogenic | -2.597 | Highly Destabilizing | 0.978 | D | 0.806 | deleterious | None | None | None | None | I |
I/H | 0.9976 | likely_pathogenic | 0.9966 | pathogenic | -1.83 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
I/K | 0.9887 | likely_pathogenic | 0.9848 | pathogenic | -1.569 | Destabilizing | 0.978 | D | 0.799 | deleterious | None | None | None | None | I |
I/L | 0.6543 | likely_pathogenic | 0.6048 | pathogenic | -1.117 | Destabilizing | 0.294 | N | 0.442 | neutral | N | 0.474654603 | None | None | I |
I/M | 0.6354 | likely_pathogenic | 0.5725 | pathogenic | -0.789 | Destabilizing | 0.976 | D | 0.692 | prob.neutral | D | 0.533490499 | None | None | I |
I/N | 0.9642 | likely_pathogenic | 0.9474 | pathogenic | -1.474 | Destabilizing | 0.99 | D | 0.806 | deleterious | D | 0.523148152 | None | None | I |
I/P | 0.9569 | likely_pathogenic | 0.9535 | pathogenic | -1.45 | Destabilizing | 0.993 | D | 0.807 | deleterious | None | None | None | None | I |
I/Q | 0.9923 | likely_pathogenic | 0.9895 | pathogenic | -1.61 | Destabilizing | 0.993 | D | 0.8 | deleterious | None | None | None | None | I |
I/R | 0.9843 | likely_pathogenic | 0.9801 | pathogenic | -0.956 | Destabilizing | 0.978 | D | 0.809 | deleterious | None | None | None | None | I |
I/S | 0.977 | likely_pathogenic | 0.968 | pathogenic | -2.123 | Highly Destabilizing | 0.942 | D | 0.765 | deleterious | D | 0.526996039 | None | None | I |
I/T | 0.8833 | likely_pathogenic | 0.8361 | pathogenic | -1.94 | Destabilizing | 0.822 | D | 0.748 | deleterious | N | 0.518602248 | None | None | I |
I/V | 0.192 | likely_benign | 0.1591 | benign | -1.45 | Destabilizing | 0.006 | N | 0.251 | neutral | N | 0.491009773 | None | None | I |
I/W | 0.9974 | likely_pathogenic | 0.9969 | pathogenic | -1.701 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | I |
I/Y | 0.9917 | likely_pathogenic | 0.9886 | pathogenic | -1.482 | Destabilizing | 0.978 | D | 0.742 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.