Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21402 | 64429;64430;64431 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
N2AB | 19761 | 59506;59507;59508 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
N2A | 18834 | 56725;56726;56727 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
N2B | 12337 | 37234;37235;37236 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
Novex-1 | 12462 | 37609;37610;37611 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
Novex-2 | 12529 | 37810;37811;37812 | chr2:178586697;178586696;178586695 | chr2:179451424;179451423;179451422 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1157697777 | -1.231 | 0.002 | N | 0.248 | 0.086 | 0.42264334713 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1157697777 | -1.231 | 0.002 | N | 0.248 | 0.086 | 0.42264334713 | gnomAD-4.0.0 | 4.77809E-06 | None | None | None | None | I | None | 0 | 4.5754E-05 | None | 0 | 0 | None | 1.88253E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8365 | likely_pathogenic | 0.7824 | pathogenic | -2.075 | Highly Destabilizing | 0.525 | D | 0.487 | neutral | None | None | None | None | I |
I/C | 0.8509 | likely_pathogenic | 0.8253 | pathogenic | -1.55 | Destabilizing | 0.998 | D | 0.578 | neutral | None | None | None | None | I |
I/D | 0.9681 | likely_pathogenic | 0.9518 | pathogenic | -1.785 | Destabilizing | 0.991 | D | 0.638 | neutral | None | None | None | None | I |
I/E | 0.8708 | likely_pathogenic | 0.8162 | pathogenic | -1.731 | Destabilizing | 0.974 | D | 0.635 | neutral | None | None | None | None | I |
I/F | 0.3557 | ambiguous | 0.3063 | benign | -1.406 | Destabilizing | 0.934 | D | 0.527 | neutral | N | 0.49877832 | None | None | I |
I/G | 0.9622 | likely_pathogenic | 0.9492 | pathogenic | -2.443 | Highly Destabilizing | 0.974 | D | 0.634 | neutral | None | None | None | None | I |
I/H | 0.7886 | likely_pathogenic | 0.7338 | pathogenic | -1.534 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | I |
I/K | 0.7052 | likely_pathogenic | 0.6246 | pathogenic | -1.429 | Destabilizing | 0.974 | D | 0.637 | neutral | None | None | None | None | I |
I/L | 0.2002 | likely_benign | 0.1873 | benign | -1.098 | Destabilizing | 0.005 | N | 0.271 | neutral | N | 0.480403203 | None | None | I |
I/M | 0.2321 | likely_benign | 0.2057 | benign | -1.012 | Destabilizing | 0.934 | D | 0.543 | neutral | N | 0.479597991 | None | None | I |
I/N | 0.759 | likely_pathogenic | 0.6985 | pathogenic | -1.397 | Destabilizing | 0.989 | D | 0.649 | neutral | N | 0.464390118 | None | None | I |
I/P | 0.9936 | likely_pathogenic | 0.9921 | pathogenic | -1.396 | Destabilizing | 0.991 | D | 0.635 | neutral | None | None | None | None | I |
I/Q | 0.7509 | likely_pathogenic | 0.6781 | pathogenic | -1.561 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | I |
I/R | 0.6304 | likely_pathogenic | 0.5476 | ambiguous | -0.827 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | I |
I/S | 0.7663 | likely_pathogenic | 0.7067 | pathogenic | -2.081 | Highly Destabilizing | 0.966 | D | 0.611 | neutral | N | 0.518516087 | None | None | I |
I/T | 0.6335 | likely_pathogenic | 0.562 | ambiguous | -1.908 | Destabilizing | 0.801 | D | 0.521 | neutral | N | 0.491638917 | None | None | I |
I/V | 0.0986 | likely_benign | 0.0929 | benign | -1.396 | Destabilizing | 0.002 | N | 0.248 | neutral | N | 0.421760331 | None | None | I |
I/W | 0.9076 | likely_pathogenic | 0.8974 | pathogenic | -1.481 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | I |
I/Y | 0.7402 | likely_pathogenic | 0.6826 | pathogenic | -1.259 | Destabilizing | 0.991 | D | 0.588 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.