Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21407 | 64444;64445;64446 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
N2AB | 19766 | 59521;59522;59523 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
N2A | 18839 | 56740;56741;56742 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
N2B | 12342 | 37249;37250;37251 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
Novex-1 | 12467 | 37624;37625;37626 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
Novex-2 | 12534 | 37825;37826;37827 | chr2:178586682;178586681;178586680 | chr2:179451409;179451408;179451407 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1413732448 | None | 0.379 | N | 0.475 | 0.17 | 0.319402600006 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1413732448 | None | 0.379 | N | 0.475 | 0.17 | 0.319402600006 | gnomAD-4.0.0 | 6.09034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.22986E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2957 | likely_benign | 0.2282 | benign | -0.553 | Destabilizing | 0.004 | N | 0.225 | neutral | N | 0.503109491 | None | None | N |
E/C | 0.9386 | likely_pathogenic | 0.9022 | pathogenic | -0.458 | Destabilizing | 0.992 | D | 0.581 | neutral | None | None | None | None | N |
E/D | 0.3369 | likely_benign | 0.2902 | benign | -1.362 | Destabilizing | 0.004 | N | 0.202 | neutral | N | 0.478424478 | None | None | N |
E/F | 0.9346 | likely_pathogenic | 0.8941 | pathogenic | 0.311 | Stabilizing | 0.972 | D | 0.56 | neutral | None | None | None | None | N |
E/G | 0.4291 | ambiguous | 0.3327 | benign | -0.993 | Destabilizing | 0.379 | N | 0.475 | neutral | N | 0.500570619 | None | None | N |
E/H | 0.847 | likely_pathogenic | 0.768 | pathogenic | -0.027 | Destabilizing | 0.92 | D | 0.431 | neutral | None | None | None | None | N |
E/I | 0.6356 | likely_pathogenic | 0.5286 | ambiguous | 0.667 | Stabilizing | 0.85 | D | 0.567 | neutral | None | None | None | None | N |
E/K | 0.469 | ambiguous | 0.3467 | ambiguous | -0.765 | Destabilizing | 0.016 | N | 0.211 | neutral | N | 0.486811887 | None | None | N |
E/L | 0.5553 | ambiguous | 0.4558 | ambiguous | 0.667 | Stabilizing | 0.617 | D | 0.513 | neutral | None | None | None | None | N |
E/M | 0.6523 | likely_pathogenic | 0.5478 | ambiguous | 1.074 | Stabilizing | 0.992 | D | 0.512 | neutral | None | None | None | None | N |
E/N | 0.6535 | likely_pathogenic | 0.5457 | ambiguous | -1.383 | Destabilizing | 0.447 | N | 0.399 | neutral | None | None | None | None | N |
E/P | 0.6296 | likely_pathogenic | 0.532 | ambiguous | 0.283 | Stabilizing | 0.92 | D | 0.417 | neutral | None | None | None | None | N |
E/Q | 0.3053 | likely_benign | 0.2387 | benign | -1.147 | Destabilizing | 0.099 | N | 0.223 | neutral | N | 0.489505476 | None | None | N |
E/R | 0.6225 | likely_pathogenic | 0.5117 | ambiguous | -0.45 | Destabilizing | 0.447 | N | 0.387 | neutral | None | None | None | None | N |
E/S | 0.4915 | ambiguous | 0.3825 | ambiguous | -1.737 | Destabilizing | 0.447 | N | 0.393 | neutral | None | None | None | None | N |
E/T | 0.4766 | ambiguous | 0.3624 | ambiguous | -1.359 | Destabilizing | 0.617 | D | 0.396 | neutral | None | None | None | None | N |
E/V | 0.4177 | ambiguous | 0.3196 | benign | 0.283 | Stabilizing | 0.379 | N | 0.481 | neutral | N | 0.472435649 | None | None | N |
E/W | 0.976 | likely_pathogenic | 0.96 | pathogenic | 0.518 | Stabilizing | 0.992 | D | 0.648 | neutral | None | None | None | None | N |
E/Y | 0.9104 | likely_pathogenic | 0.8533 | pathogenic | 0.557 | Stabilizing | 0.972 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.