Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21409 | 64450;64451;64452 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
N2AB | 19768 | 59527;59528;59529 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
N2A | 18841 | 56746;56747;56748 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
N2B | 12344 | 37255;37256;37257 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
Novex-1 | 12469 | 37630;37631;37632 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
Novex-2 | 12536 | 37831;37832;37833 | chr2:178586676;178586675;178586674 | chr2:179451403;179451402;179451401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.055 | N | 0.213 | 0.199 | 0.229264304666 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1272 | likely_benign | 0.108 | benign | -0.189 | Destabilizing | 0.012 | N | 0.33 | neutral | N | 0.454566183 | None | None | N |
E/C | 0.687 | likely_pathogenic | 0.6081 | pathogenic | -0.11 | Destabilizing | 0.864 | D | 0.377 | neutral | None | None | None | None | N |
E/D | 0.0556 | likely_benign | 0.0557 | benign | -0.23 | Destabilizing | None | N | 0.083 | neutral | N | 0.433553406 | None | None | N |
E/F | 0.6373 | likely_pathogenic | 0.5418 | ambiguous | -0.143 | Destabilizing | 0.628 | D | 0.39 | neutral | None | None | None | None | N |
E/G | 0.0735 | likely_benign | 0.0624 | benign | -0.358 | Destabilizing | None | N | 0.199 | neutral | N | 0.360325084 | None | None | N |
E/H | 0.3878 | ambiguous | 0.3085 | benign | 0.242 | Stabilizing | 0.356 | N | 0.268 | neutral | None | None | None | None | N |
E/I | 0.3097 | likely_benign | 0.2562 | benign | 0.21 | Stabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
E/K | 0.2346 | likely_benign | 0.1788 | benign | 0.301 | Stabilizing | 0.055 | N | 0.213 | neutral | N | 0.426032788 | None | None | N |
E/L | 0.3118 | likely_benign | 0.2519 | benign | 0.21 | Stabilizing | 0.072 | N | 0.375 | neutral | None | None | None | None | N |
E/M | 0.4066 | ambiguous | 0.3438 | ambiguous | 0.116 | Stabilizing | 0.864 | D | 0.345 | neutral | None | None | None | None | N |
E/N | 0.1161 | likely_benign | 0.1023 | benign | 0.126 | Stabilizing | 0.038 | N | 0.185 | neutral | None | None | None | None | N |
E/P | 0.4906 | ambiguous | 0.3999 | ambiguous | 0.097 | Stabilizing | 0.136 | N | 0.318 | neutral | None | None | None | None | N |
E/Q | 0.1749 | likely_benign | 0.1491 | benign | 0.141 | Stabilizing | 0.055 | N | 0.291 | neutral | N | 0.47488274 | None | None | N |
E/R | 0.376 | ambiguous | 0.2921 | benign | 0.553 | Stabilizing | 0.072 | N | 0.282 | neutral | None | None | None | None | N |
E/S | 0.1156 | likely_benign | 0.1004 | benign | -0.07 | Destabilizing | 0.016 | N | 0.244 | neutral | None | None | None | None | N |
E/T | 0.1439 | likely_benign | 0.1255 | benign | 0.063 | Stabilizing | 0.072 | N | 0.293 | neutral | None | None | None | None | N |
E/V | 0.2052 | likely_benign | 0.1709 | benign | 0.097 | Stabilizing | 0.106 | N | 0.377 | neutral | N | 0.467938125 | None | None | N |
E/W | 0.8115 | likely_pathogenic | 0.7509 | pathogenic | -0.047 | Destabilizing | 0.864 | D | 0.405 | neutral | None | None | None | None | N |
E/Y | 0.4576 | ambiguous | 0.3874 | ambiguous | 0.09 | Stabilizing | 0.628 | D | 0.371 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.